DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and nedd4

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_031755033.1 Gene:nedd4 / 100496333 XenbaseID:XB-GENE-478443 Length:1283 Species:Xenopus tropicalis


Alignment Length:1231 Identity:369/1231 - (29%)
Similarity:512/1231 - (41%) Gaps:384/1231 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGNGLPAGAASGGMEAGQTVNGAGSASPTPTSSSGAGASGSANQGYHQLSVTIEEASLRN---NG 64
            :|:.|...|:..|   ..:.|.:...|...|:|.....:.|........:.::.:::..|   ||
 Frog   146 NGSLLSISASDNG---SYSSNSSDYGSCASTASDAGSCANSIVSDCSSCTYSLSDSNYLNVLPNG 207

  Fly    65 ---FLKPNPYVELLIDSKSKRKTDLVKNSYLPKWNEEFTVLITPNSTLHFKVLDHSS-------F 119
               |..|....|..   |||.:..|..|                |...||. ||||.       .
 Frog   208 NALFFNPEENCEFF---KSKLEEPLPIN----------------NCKFHFD-LDHSEKEEVRIPA 252

  Fly   120 RKDAMLGERIINLAHILQHYNGRCEFL------------------------ELTIDLFVTS---- 156
            ||...:..|             ||..|                        :.:..|.::|    
 Frog   253 RKKTRIPLR-------------RCSSLVIFPSDTPPTSPTSLVPPLSRGCYQTSYQLMLSSNDFT 304

  Fly   157 KSDNRQTKSGELVAILNGLKLDMSKLQIQPVA--------GQQNGNPPV----------QAVNPS 203
            :.:.:....|.|...:||::|..:...:..|.        .:.:|.|.:          ....|.
 Frog   305 QKEEQAASKGSLSTAVNGVRLSKNTCNVGEVRDVKPLYLNDKDDGLPNICNSVAEHSKLHEDKPQ 369

  Fly   204 VVSDAAAGRSCMIYGGVRARMRLRSSSGNSNGGET------RSPLPNGGGDH---------RRST 253
            :.|||   |.|.:         :||:|..|...:|      ||........|         |..:
 Frog   370 LNSDA---RHCRL---------VRSTSAYSPSNKTVECQMGRSSEQGYKNIHKCQLTHVFQRSVS 422

  Fly   254 QAPPVWEQQQQQSQNQQQPLRMVNGSGAAVPQTAP--------------------YPQQPPA--- 295
            :.||    |::.|.:..:.....:||.....|.||                    .|.:|..   
 Frog   423 EGPP----QKRSSASSLKCRHPKSGSSYLHIQFAPGNESRISSYKKQSLRSPTTELPGKPSVKLL 483

  Fly   296 ---------------------PALARPLT-------------QVYGALPENTQPAAVYLPAGGG- 325
                                 |.|.||.|             :|.|    |.:....|||...| 
 Frog   484 KTRDDFLGQVDVPLHQLPTENPRLERPYTFKDFILHPRSHKSRVKG----NLRLKMTYLPKNNGS 544

  Fly   326 -------AAVGPPGVAGPPIEQPGVGLPVSQSTDPQLQTQPADDEPLPAGWEIRLDQYGRRYYVD 383
                   |....||..  .::||      ..|..||   |..:..|||.|||.|.|..||.|||.
 Frog   545 EDENAEQAEEMEPGWV--ILDQP------DTSCQPQ---QEQELSPLPPGWEERQDILGRTYYVS 598

  Fly   384 HNTRSTYWEKPT----------------------------------------------------- 395
            |..|.|.|::||                                                     
 Frog   599 HQYRRTQWQRPTIQDDTAANESRNVQLEEQHHHAFTTRRQISEETESRDSPESWEIITEDETTIY 663

  Fly   396 ----------------------------------------------------------------- 395
                                                                             
 Frog   664 SNQNAQQGSAPTSDAQAQITEELSIRLNISGNMPNSRQSSSNVHSNRRESLQSYTSEELPTVPVL 728

  Fly   396 -----PLPPGWEIRKDGRGRVYYVDHNTRKTTWQRPNSERLMHFQHWQGQRAHVVSQGNQRYLYS 455
                 .||||||.:.|.:||.||:|||:|.|||::|:|:                :||......:
 Frog   729 LPTSSGLPPGWEEKHDDKGRSYYIDHNSRTTTWEKPSSQ----------------AQGPTETFQT 777

  Fly   456 QQQQ------QPTAVTAQVTQDDEDALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQ--- 511
            ...|      ||...|.:.||..|.....||.|||.:.....|.:::||..:||.|||||.:   
 Frog   778 SSVQNVPVIFQPQTATRESTQLLETEQRFLPKGWEVRHAPTGRPFYINHVTKTTTWEDPRLKIPV 842

  Fly   512 ----GQEVSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPR--------PGAPKGAKGVY 564
                ...:.|.:.||||||||.|....|..|::||||::|.:||||        |..|       
 Frog   843 QLRPKPPIDLSDLGPLPPGWEERTHNDGRVFYIDHNTKQTQWEDPRLQTAAITGPAVP------- 900

  Fly   565 GVPRAYERSFRWKLSQFR-YLCQSNALPSHIKITVTRQTLFEDSYHQIMRLPAYE-LRRRLYIIF 627
                 |.|.::.|...|| .|.:...:|:..::.:.|..:.||||.:|:.:...| |:.||:|.|
 Frog   901 -----YSRDYKRKYEYFRKKLKKQIDIPNRFEMKLRRTAILEDSYRRIIAVKRPEFLKARLWIEF 960

  Fly   628 RGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPAS-YVNPDHLQYFKFIGRFI 691
            ..|:|||||||:||||||:|.|:.||.|.||||:..:||:|||||.| ..|.|||.|||||||..
 Frog   961 DNEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVA 1025

  Fly   692 AMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFE 756
            .||:|||:.:.:.|..||||.||.|.:.:.|:|::|.|:||||.|:.:|  |..||:|.|:||.|
 Frog  1026 GMAVYHGKLLDAFFIRPFYKMMLQKPIILYDMESVDSEYYNSLQWILEN--DPSGLDLCFTVDEE 1088

  Fly   757 VLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDE 821
            :.||...||||..|.:..||.:||:|||.|:.:||....:::|...|.|||.|::|.:.:|.|||
 Frog  1089 LFGQTHQHELKAGGSQILVTNKNKKEYIHLVIQWRFMNRVQKQMAAFKEGFFELIPQDLIKIFDE 1153

  Fly   822 RELELILCGMQDVDVEDWQRNTIYRH-YNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPV 885
            .||||::||:.||||.:|:.:|.|:: |::..:.:.|||:.|...|.|||.|||||||||.|||:
 Frog  1154 NELELLMCGLGDVDVNNWREHTKYKNGYSQGHQVIQWFWKAVLMMDAEKRIRLLQFVTGTSRVPM 1218

  Fly   886 GGFAELMGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            .|||||.||||||.|.:||.|....|||:||||||||||||:|::.|.:||..|||..:||
 Frog  1219 NGFAELYGSNGPQLFTVEKWGTPEKLPRAHTCFNRLDLPPYESFEDLWDKLHIAIENAQGF 1279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988 28/165 (17%)
WW 364..396 CDD:197736 19/154 (12%)
WW 397..426 CDD:278809 18/28 (64%)
WW 478..509 CDD:197736 13/30 (43%)
WW 522..554 CDD:197736 19/39 (49%)
HECTc 594..946 CDD:238033 184/354 (52%)
HECTc 620..946 CDD:214523 176/327 (54%)
nedd4XP_031755033.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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