DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and wwp2

DIOPT Version :10

Sequence 1:NP_476753.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001090841.1 Gene:wwp2 / 100038252 XenbaseID:XB-GENE-961516 Length:729 Species:Xenopus tropicalis


Alignment Length:718 Identity:431/718 - (60%)
Similarity:514/718 - (71%) Gaps:87/718 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 APPVWEQQQQQSQNQQQPLR----------MVNG-SGAAVPQTAPYPQQ--------PPAPALAR 300
            :||     |..|.:..||::          :||| |..|.......|.|        .|.|:|..
 Frog    76 SPP-----QSASSDSSQPIKNQDNTSNITVLVNGESSHATSSELDVPAQDEAFSNISSPLPSLGS 135

  Fly   301 PLTQVYGALPENTQPAAVYLPAGGGAAVGPPGVAGPPIEQPGVGLPVSQSTDPQLQTQPADDEPL 365
            .|........::.||:|:                          .|.|              |.|
 Frog   136 ELRSEDNEDTQSLQPSAL--------------------------TPTS--------------EGL 160

  Fly   366 PAGWEIRLDQYGRRYYVDHNTRSTYWEKPTPLPPGWEIRKDGRGRVYYVDHNTRKTTWQRPNSER 430
            |.|||.|....||.|||||||:||.||:|.||  |||.|.|.|||.||||||||.||||||.:|.
 Frog   161 PPGWEQRELSNGRVYYVDHNTKSTTWERPLPL--GWEKRVDNRGRFYYVDHNTRTTTWQRPTAEY 223

  Fly   431 LMHFQHWQGQRAHV---VSQGNQRYLYSQQQQQPTAVTAQVTQDDEDALGPLPDGWEKKIQSDNR 492
            :.:::.||.||..:   :.|.:||:||......|          |.|.|||||:||||: |.:.|
 Frog   224 VRNYEQWQSQRNQMQGAMQQLSQRFLYQPSSAAP----------DNDPLGPLPNGWEKR-QDNGR 277

  Fly   493 VYFVNHKNRTTQWEDPRTQGQEVSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPGAP 557
            ||:|||..||||||||||||    :|.|..||||||::||:.|.|:|||||.|.|||:|||||..
 Frog   278 VYYVNHNTRTTQWEDPRTQG----MIQEPALPPGWEMKYTSEGIRYFVDHNKRATTFKDPRPGFD 338

  Fly   558 KGAK-GVYGVPRAYERSFRWKLSQFRYLCQSNALPSHIKITVTRQTLFEDSYHQIMRLPAYELRR 621
            .|.| |  |.|.||:||||||..|||:||.|||||||:||:|:||||||||:.|||.:..|:|||
 Frog   339 SGVKQG--GSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRR 401

  Fly   622 RLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKF 686
            |||||.||||||||||::||||||||||||||||||||||.||||.|||||||.:|||||.||:|
 Frog   402 RLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRF 466

  Fly   687 IGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWF 751
            ||||||||||||:||.:|||:||||||||||.|::|:|:||||||||::|:||||::||.|||:|
 Frog   467 IGRFIAMALYHGKFIDTGFTLPFYKRMLNKKPTLRDLESIDPEFYNSIMWIKDNNLEECELELYF 531

  Fly   752 SVDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWL 816
            ..|.|:||::..|:|||.||..|||||||||:|:|:|:||.|||:|:||..||:||.||||||||
 Frog   532 VQDMEILGEVTSHKLKEGGENIRVTEENKEEFISLLTDWRFTRGVEEQTNAFLDGFKEVVPLEWL 596

  Fly   817 KYFDERELELILCGMQDVDVEDWQRNTIYRHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTC 881
            :||||:||||:|||||::|:.|||:|||||||.:|||||.||||.|:|.|||||.||||||||||
 Frog   597 RYFDEKELELMLCGMQEIDIADWQKNTIYRHYTKNSKQVQWFWQVVKEMDNEKRIRLLQFVTGTC 661

  Fly   882 RVPVGGFAELMGSNGPQRFCIEKVGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEGF 946
            |:|||||.||:||||||:|||::|||:|||||||||||||||||||||:||.|||.|||||||||
 Frog   662 RLPVGGFVELIGSNGPQKFCIDRVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGF 726

  Fly   947 CQE 949
            .||
 Frog   727 GQE 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_476753.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736 20/31 (65%)
HUL4 <395..946 CDD:227354 384/554 (69%)
wwp2NP_001090841.1 WW 160..189 CDD:459800 19/28 (68%)
WW 190..219 CDD:459800 22/30 (73%)
WW 264..294 CDD:197736 21/30 (70%)
WW 305..335 CDD:238122 20/29 (69%)
HECTc 375..727 CDD:238033 269/351 (77%)
Blue background indicates that the domain is not in the aligned region.

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