DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(dx) and plekha7b

DIOPT Version :9

Sequence 1:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_021327578.1 Gene:plekha7b / 100005106 ZFINID:ZDB-GENE-091014-2 Length:1359 Species:Danio rerio


Alignment Length:364 Identity:91/364 - (25%)
Similarity:125/364 - (34%) Gaps:117/364 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 LPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLINEG-----PLPPGWEIRYTAAGERF 538
            |||.|...:..|.||:|:|.|.|.|.|..||| |:.|   |.|     .||.|||..:|..|..:
Zfish    10 LPDHWSYGVCRDGRVFFINDKTRDTTWLHPRT-GEPV---NSGHMIRSDLPRGWEEGFTEEGASY 70

  Fly   539 FVDHNTRRTTFEDPRPGAPKGAKGVYGV------------PRAYERSFRWKLSQFRYLCQS---- 587
            |::||.|.|||..|..|........:.:            |.|...|.   :|:......|    
Zfish    71 FINHNQRSTTFRHPVTGHISSENTDFILQDQANLRMSKPPPEARPPSM---VSESSVAISSSPAD 132

  Fly   588 ------NALPSHIKITVTRQTLFEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLL 646
                  |..||      .:...|....|.|.|.|...:..|.::..:...|:...  .|:||.|.
Zfish   133 ATSGSRNLKPS------GKVHCFGKRDHSIKRNPNVPVVVRGWLYKQDSSGMRLW--KRKWFVLS 189

  Fly   647 SHEVLNPMYCLFEYANKNNYSL--QINPASYV-NP----DHLQYFKFIGRFIAMALYHGRFIYSG 704
            .       ||||.|.:....::  .|...||| :|    ||      |.|..|....|     :|
Zfish   190 D-------YCLFYYKDSREETVLGSIPLPSYVISPVGPEDH------ISRKYAFKACH-----TG 236

  Fly   705 FTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELW-FSVDFEVLGQIIHHELKE 768
            .....|.:                   ||||   .:..:.||:..: ||.|              
Zfish   237 MRSYIYNK-------------------NSLI---GSQAEHCGMRTYFFSAD-------------- 265

  Fly   769 NGEKERVTEENKEEYI------TLMTEWRMTRGIEQQTK 801
                   |:|:...:|      .||....|.|..|:.:|
Zfish   266 -------TQEDMNGWIRAMNQAALMQSHGMKREAERSSK 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988
WW 364..396 CDD:197736
WW 397..426 CDD:278809
WW 478..509 CDD:197736 13/29 (45%)
WW 522..554 CDD:197736 15/31 (48%)
HECTc 594..946 CDD:238033 47/222 (21%)
HECTc 620..946 CDD:214523 42/196 (21%)
plekha7bXP_021327578.1 WW 10..39 CDD:306827 13/28 (46%)
WW 55..84 CDD:306827 14/28 (50%)
PH_PEPP1_2_3 158..281 CDD:270068 38/185 (21%)
SMC_N 645..>882 CDD:330553
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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