DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4238 and Wwtr1

DIOPT Version :9

Sequence 1:NP_001259896.1 Gene:CG4238 / 33377 FlyBaseID:FBgn0031384 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_001161753.1 Gene:Wwtr1 / 97064 MGIID:1917649 Length:452 Species:Mus musculus


Alignment Length:176 Identity:35/176 - (19%)
Similarity:46/176 - (26%) Gaps:83/176 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 CKVQWDWKDPASVGGTMCFVVRFFQRNGQPYPI-------------CDTD--------------- 277
            |::...|:.|..|.|..      ...:..|:|:             .|||               
Mouse    41 CRLLAQWERPRPVPGIK------MNPSSVPHPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSS 99

  Fly   278 --------HFFVEVTEGTRKVVTISELGSSTDPNNANIAKVKFTVRTAGQYKISVLIGASHIAGS 334
                    .||.|...|:.      ...||||.:..:...     |.||        ||.|:   
Mouse   100 WRKKILPESFFKEPDSGSH------SRQSSTDSSGGHPGP-----RLAG--------GAQHV--- 142

  Fly   335 PFLRSFLPGAIDARRSRFIRPAS----TVICCAGAPTLMHIEPRDE 376
                          ||. ..|||    |....||.|...|...|.:
Mouse   143 --------------RSH-SSPASLQLGTGAGAAGGPAQQHAHLRQQ 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4238NP_001259896.1 IG_FLMN 238..336 CDD:214720 24/130 (18%)
Filamin 238..336 CDD:279024 24/130 (18%)
HECTc 615..975 CDD:238033
HECTc 642..974 CDD:214523
Wwtr1NP_001161753.1 WW 182..213 CDD:197736
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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