DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4238 and Hectd3

DIOPT Version :9

Sequence 1:NP_001259896.1 Gene:CG4238 / 33377 FlyBaseID:FBgn0031384 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_780453.1 Gene:Hectd3 / 76608 MGIID:1923858 Length:861 Species:Mus musculus


Alignment Length:825 Identity:165/825 - (20%)
Similarity:293/825 - (35%) Gaps:241/825 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 IGASHIAGSPFLRSFLPGAIDARRSRFIRPASTVICCA-GAPTLMHIEPRDEFGNSCLFDQN--- 386
            :||:...||..||: ...:|:.||...:|.....:|.. |....:..|...|..:.|..|:.   
Mouse    78 VGAAPGTGSGPLRA-ARDSIELRRGACVRTTGEELCNGHGLWVKLTKEQLAEHLSDCSLDEGWLL 141

  Fly   387 --------------QSDEALQGYQVAIYDLHGV---PVEKLQHAIVFAYD-KVNSRVSVTALFPE 433
                          .:.:.||..|    .|.||   ||.:.:..:...|. ::.||......:.|
Mouse   142 VCRPAEGGARLVPIDTPDHLQRQQ----QLFGVDYRPVLRWEQVVDLTYSHRLGSRPQPAEAYTE 202

  Fly   434 ---------PT----CLRAVISY-------RDQQLPN--------------GDFDIIVLSSSDTT 464
                     ||    |...:|.:       .|:.|.:              .:|::..|:.|:..
Mouse   203 AIQRLLYVPPTWTYECDEDLIHFLYDHLGKEDENLGSVKQYVESIDVSSYTEEFNVSCLTDSNAD 267

  Fly   465 LVHKNIASR---------KHNICYEAKLLSIFGVSKN-KPRKVLCYVGPKQN-----------SL 508
            ...::..|:         |.....:..||::.....| .|::|:.|.|...|           :|
Mouse   268 TYWESDGSQCQHWVRLTMKKGTIVKKLLLTVDTTDDNFMPKRVVVYGGEGDNLKKLSDVNIDETL 332

  Fly   509 IFQVTIKEMILKFIPKRIATFRLCP-----------STKFHFLPQ----LVSQLHGPVFIID--- 555
            |..|.:.|.:...:|  |...|:..           ..|.....|    |.:.|..|..::.   
Mouse   333 IGDVCVLEDMTVHLP--IIEIRIVECRDDGIDVRLRGVKIKSSRQRELGLNADLFQPASLVRYPR 395

  Fly   556 -DGAQPKI-----ELASKDRNIIAATFTHFLL---KNIGGSETFKDKQDFFYHEVRKFHASYYHE 611
             :|..|::     .|..:...|:.:...|.:.   ..:|   ||.:     ..:|::|       
Mouse   396 LEGTDPEVLYRRAVLLQRFIKILDSVLHHLVPAWDHTLG---TFSE-----IKQVKQF------- 445

  Fly   612 KMALKVQREKI----LESSMKAVKGF------------------SVSDWCGN--FEVTFQG---- 648
             :.|..||..:    |..|..:...|                  |....|.|  |...::|    
Mouse   446 -LLLSRQRPSLVAQCLRDSESSKPSFMPRLYINRRLAMEHRACPSRDPACKNAVFTQVYEGLKPS 509

  Fly   649 ---EQGID--WGGLRREWFE--LVCSALFDARGGLFCTFHDKHQALVH----------------- 689
               |:.:|  |.....:|:|  .:...:.|..||...:..|..:.|..                 
Mouse   510 DKYEKPLDYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCPSSADTPVPLPFFVRTAN 574

  Fly   690 -------------PNPTRPAHLKLKHFEFAGKMVGKCLFESALGGTYRQLVRARFSRSFLA---- 737
                         |||:.....|   :|:.|:::|     :||.|           :.||.    
Mouse   575 QGNGTGEARDMYVPNPSCRDFAK---YEWIGQLMG-----AALRG-----------KEFLVLALP 620

  Fly   738 -----QLIGLRVHYKYFEQDDP--DLYLSKIKYILDTDLDATDTLELYFVEEMYDSSSGQLSKTI 795
                 ||.|..|.:   .:|.|  |..|.|:..::: .:| .:|.|..|.:|:..::.....:.:
Mouse   621 GFVWKQLSGEEVSW---SKDFPAVDSVLVKLLEVME-GVD-KETFEFKFGKELTFTTVLSDQQVV 680

  Fly   796 ELIPNGAKTRVTNATKNQYLDALAQQRLCNNVKDEVDSFLKGLNSIIPDNLLSIFDENELELLMC 860
            ||||.|....|....:::::..:.:.|| ...|::|.:...||..::|..:|.:....|||..:|
Mouse   681 ELIPGGTGIVVEYEDRSRFIQLVRKARL-EESKEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVC 744

  Fly   861 GTGEYSISDF-KAHHIANGNSAEFRRVLAWFWAGVSNFSQTEMARLLQFTTGCSQLPPGGFQELN 924
            |..|.::... |.....:...::.|  :.:||..::||:..:.:|.|:|.||.|:||...:  :.
Mouse   745 GDPEVTVDALRKLTRFEDFEPSDTR--VQYFWEALNNFTNEDRSRFLRFVTGRSRLPARIY--IY 805

  Fly   925 PQ---FQITAAPTFGNLPTAHTCFNQLCLPDYESYEQFEKSLLLA 966
            |.   ::.|.|     ||.:.||.:.|.||.|.|.:..|:.|..|
Mouse   806 PDKLGYETTDA-----LPESSTCSSTLFLPHYASAKVCEEKLRYA 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4238NP_001259896.1 IG_FLMN 238..336 CDD:214720 4/9 (44%)
Filamin 238..336 CDD:279024 4/9 (44%)
HECTc 615..975 CDD:238033 96/432 (22%)
HECTc 642..974 CDD:214523 87/381 (23%)
Hectd3NP_780453.1 APC10-HECTD3 238..371 CDD:176487 21/134 (16%)
HECTc 528..849 CDD:214523 81/352 (23%)
HECT 586..845 CDD:279026 74/292 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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