DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4238 and UBE3A

DIOPT Version :9

Sequence 1:NP_001259896.1 Gene:CG4238 / 33377 FlyBaseID:FBgn0031384 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_000453.2 Gene:UBE3A / 7337 HGNCID:12496 Length:875 Species:Homo sapiens


Alignment Length:584 Identity:140/584 - (23%)
Similarity:258/584 - (44%) Gaps:105/584 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   440 VIS--YRDQQLPNGDFDIIVLSSSDTTLVHKNI----ASRKHN---------ICYEAKLLSIFGV 489
            |||  :..:.|.|.|..|:..|.....:.:.|:    ....||         ...|..|..:.|.
Human   351 VISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVDTNHNEEDDEEPIPESSELTLQELLGE 415

  Fly   490 SKNKPRKVLCYVGPKQNSLIFQVTIKEMILKFIPKRIATFRLCPSTKFHFLPQLVSQLHGPVFII 554
            .:...:      ||:.:.|..::.:|.:..:   |.:..|.           :.:::....|..:
Human   416 ERRNKK------GPRVDPLETELGVKTLDCR---KPLIPFE-----------EFINEPLNEVLEM 460

  Fly   555 D-DGAQPKIELASKDRNIIAATFTHFLLKNIGGSETFKDKQDFFYHEVRKFHASY-------YHE 611
            | |....|:|..:|...:......:.:.||:|   .:.|.:...|.| |:....|       .:.
Human   461 DKDYTFFKVETENKFSFMTCPFILNAVTKNLG---LYYDNRIRMYSE-RRITVLYSLVQGQQLNP 521

  Fly   612 KMALKVQREKILESSMKAVKGFSV---SDWCGNFEVTFQGEQGIDWGGLRREWFELVCSALFDAR 673
            .:.|||:|:.|::.::..::..::   :|......|.|:||||:|.||:.:|:|:||...:|:..
Human   522 YLRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPD 586

  Fly   674 GGLFCTFHDKHQALVHPNPTRPAHLKLKHFEFAGK------MVGKCLFESALGGTYRQLVRARFS 732
            .|:|.  :|:...|...||:        .||..|:      ::|..::.:.:...:..:|..|  
Human   587 IGMFT--YDESTKLFWFNPS--------SFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYR-- 639

  Fly   733 RSFLAQLIGLRVHYKYFEQDDPDLYLSKIKYILDTDLDATDTLELYFVEEMYDSSSGQLSKT--- 794
                 :|:|.:..::......|.||.| :|.:|:.:.:..|.:.:.|          |:|:|   
Human   640 -----KLMGKKGTFRDLGDSHPVLYQS-LKDLLEYEGNVEDDMMITF----------QISQTDLF 688

  Fly   795 -----IELIPNGAKTRVTNATKNQYLDALAQQRLCNNVKDEVDSFLKGLNSIIPDNLLS-IFDEN 853
                 .:|..||.|..:||..:.::::..:...|..:|:.:..:|.:|.:.:..::.|. :|...
Human   689 GNPMMYDLKENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPE 753

  Fly   854 ELELLMCGTGEYSISDFKAHHIANGNSAEFRR---VLAWFWAGVSNFSQTEMARLLQFTTGCSQL 915
            |:|||:||:...   ||:|..........:.|   ::..||..|.:|:..:....||||||..:.
Human   754 EIELLICGSRNL---DFQALEETTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRA 815

  Fly   916 PPGGFQELNPQFQITA--APTFGNLPTAHTCFNQLCLPDYESYEQFEKSLLLAISEGSEGFGMV 977
            |.||..:|.   .|.|  .|....|||:|||||.|.||:|.|.|:.::.||.||:. ::||||:
Human   816 PVGGLGKLK---MIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITY-AKGFGML 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4238NP_001259896.1 IG_FLMN 238..336 CDD:214720
Filamin 238..336 CDD:279024
HECTc 615..975 CDD:238033 103/382 (27%)
HECTc 642..974 CDD:214523 96/351 (27%)
UBE3ANP_000453.2 AZUL 29..83 CDD:406862
HECTc 523..873 CDD:238033 103/384 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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