DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4238 and magi2a

DIOPT Version :9

Sequence 1:NP_001259896.1 Gene:CG4238 / 33377 FlyBaseID:FBgn0031384 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_001314782.1 Gene:magi2a / 564112 ZFINID:ZDB-GENE-050810-4 Length:1503 Species:Danio rerio


Alignment Length:551 Identity:104/551 - (18%)
Similarity:161/551 - (29%) Gaps:228/551 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PEDA--SLRSDLVLI------------RSFVVYKGRPPDHATRFDISMLV-----SHINVG---- 49
            ||||  :|.|.|.||            .|::.|..|..........:|:.     :|::.|    
Zfish   518 PEDAANTLLSPLGLIDRPLLVNGRNSYDSYMEYISRTARFVDPLQTTMVQPHPGDTHLDAGPLED 582

  Fly    50 GVMHAATGGKTFPTLKVKLCFG-ESMGISSLSSCGDPERLPEL------PPLDEQRL-----QRA 102
            .|..|::|......|.:.:..| :..|.:...|.|. :|:.::      |.|.|..|     |:.
Zfish   583 SVSMASSGAAGGELLTINMVKGADGFGFTIADSNGG-QRVKQILEAQGCPGLCEGDLIVEINQQP 646

  Fly   103 ALHLQQ----------------------------------KLILREW---------LKDHRLQH- 123
            ||.|..                                  |.:|..|         |..|.|.| 
Zfish   647 ALTLSHTQVVELLKECPIGTEATLVIQRGGTGHFSPWKTTKQVLEHWDPLSSPTTSLSVHALPHS 711

  Fly   124 ----HYQRLLAVEVASLE--DVYWLEDSRASKILGKDWQLWSGARQNLPTSKAQLDALKAQLWST 182
                |:......::|..:  |:|  |.|||         ::...:..||.:....|. .|:....
Zfish   712 APYLHWPSGPEFDLAKPDPYDLY--EKSRA---------IYENRQPGLPRASLPADP-SAEFQEV 764

  Fly   183 VVKSSQHQDAWTWGGMLVVSVSVAGLVTLAAMTQPSLAPEARHSLLQYVTGKYLLPANCKVQWDW 247
            .|...:.:..:   |..::.....|        || ::|:|:.        |.|:.|..:     
Zfish   765 EVHLRRQKSGF---GFRILGGEEPG--------QP-VSPKAQE--------KILIGAIIE----- 804

  Fly   248 KDPASVGGTM----------CFVVRFFQRNGQPYPICDTDHFFVEVTEGTRKVVTISELGSSTDP 302
            |.||...|.:          ..||.     |:|:      .:.:::..|.               
Zfish   805 KSPADKDGRLRPGDELISVDGIVVA-----GKPH------RYVIDLMHGA--------------- 843

  Fly   303 NNANIAKVKFTVRTAGQYKISVLIGASHIAGSPFLRSFLPGAIDARRSRFIRPASTVICCAGAPT 367
              |...:||.|||...|           ..|.||..:        .||    |.||         
Zfish   844 --ARTGQVKLTVRRRVQ-----------PTGEPFPEN--------GRS----PGST--------- 874

  Fly   368 LMHIEPRDEFGNSCLFDQNQSDEALQGYQVAIYDLHGVPVEKLQHAIVFAYDKVNSRVSVTALFP 432
             .|..||.:| ||.:|..|.:...                              ||..|.|...|
Zfish   875 -QHSSPRSDF-NSRMFCNNSAPSQ------------------------------NSAPSTTGSSP 907

  Fly   433 EPTCLRAVISYRD---QQLPNGDFDIIVLSS 460
            ..|.........|   |:.....|..:::||
Zfish   908 PDTAANQNAQPNDVSIQRKETEGFGFVIISS 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4238NP_001259896.1 IG_FLMN 238..336 CDD:214720 18/107 (17%)
Filamin 238..336 CDD:279024 18/107 (17%)
HECTc 615..975 CDD:238033
HECTc 642..974 CDD:214523
magi2aNP_001314782.1 PDZ_signaling 25..100 CDD:238492
NK 122..286 CDD:302627
WW 307..337 CDD:238122
WW 352..381 CDD:278809
PDZ 431..511 CDD:214570
PDZ 595..676 CDD:214570 14/81 (17%)
PDZ 762..856 CDD:214570 25/146 (17%)
PDZ_signaling 920..1007 CDD:238492 5/19 (26%)
PDZ_signaling 1182..1262 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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