DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4238 and Wwp1

DIOPT Version :9

Sequence 1:NP_001259896.1 Gene:CG4238 / 33377 FlyBaseID:FBgn0031384 Length:977 Species:Drosophila melanogaster
Sequence 2:NP_796301.2 Gene:Wwp1 / 107568 MGIID:1861728 Length:918 Species:Mus musculus


Alignment Length:429 Identity:133/429 - (31%)
Similarity:205/429 - (47%) Gaps:45/429 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   568 DRNIIAATFTHFLLKNIGGSETFKDKQDFFYHEVRKF-----HASYYHEKMAL------KVQREK 621
            |.|....||..   ...|.|...|......|.  |.|     |..|..:..||      .|.|:.
Mouse   512 DHNTRTTTFKD---PRNGKSSVTKGGPQIAYE--RSFRWKLAHFRYLCQSNALPSHVKINVSRQT 571

  Fly   622 ILESSMKAVKGFSVSDWCGNFEVTFQGEQGIDWGGLRREWFELVCSALFDARGGLFCTFH--DKH 684
            :.|.|.:.:......|......|.|:||:|:|:|||.||||.|:...:.:.   ::|.|.  .|:
Mouse   572 LFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNP---MYCLFEYAGKN 633

  Fly   685 QALVHPNPT---RPAHLKLKHFEFAGKMVGKCLFESALGGTYRQLVRARFSRSFLAQLIGLRVHY 746
            ...:..||.   .|.|  |.:|.|.|:.:...||       :.:.:...||..|..:::..::..
Mouse   634 NYCLQINPASTINPDH--LSYFCFIGRFIAMALF-------HGKFIDTGFSLPFYKRMLSKKLTI 689

  Fly   747 KYFEQDDPDLYLSKIKYILDTDLDATDTLELYFVEEMYDSSSGQLSKTIELIPNGAKTRVTNATK 811
            |..|..|.:.|.|.| :|.|.:::... ||:||..:|  ...|::: :.:|...|:...||...|
Mouse   690 KDLESIDTEFYNSLI-WIRDNNIEECG-LEMYFSVDM--EILGKVT-SHDLKLGGSNILVTEENK 749

  Fly   812 NQYLDALAQQRLCNNVKDEVDSFLKGLNSIIPDNLLSIFDENELELLMCGTGEYSISDFKAHHIA 876
            ::|:..:.:.|....|:::..:||.|.|.::|...|..|||.|||:::||..|..::|::.:.:.
Mouse   750 DEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVY 814

  Fly   877 NGNSAEFRRVLAWFWAGVSNFSQTEMARLLQFTTGCSQLPPGGFQEL----NPQ-FQITAAPTFG 936
            ...:...:::: |||..|.........|||||.||..:||.|||.||    .|| |.|.......
Mouse   815 RHYTRNSKQII-WFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDT 878

  Fly   937 NLPTAHTCFNQLCLPDYESYEQFEKSLLLAISEGSEGFG 975
            .||.:|||||:|.||.|:||||.::.||.||.| :||||
Mouse   879 WLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEE-TEGFG 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4238NP_001259896.1 IG_FLMN 238..336 CDD:214720
Filamin 238..336 CDD:279024
HECTc 615..975 CDD:238033 118/375 (31%)
HECTc 642..974 CDD:214523 111/341 (33%)
Wwp1NP_796301.2 C2_E3_ubiquitin_ligase 17..140 CDD:175988
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..182
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 209..360
Interaction with ERBB4. /evidence=ECO:0000269|PubMed:19561640 345..525 4/15 (27%)
WW 347..376 CDD:278809
WW 379..408 CDD:278809
WW 454..483 CDD:278809
WW 495..524 CDD:238122 4/14 (29%)
HECTc 564..916 CDD:238033 117/370 (32%)
HECTc 587..915 CDD:214523 112/346 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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