DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2a and AT1G45015

DIOPT Version :9

Sequence 1:NP_608637.1 Gene:Npc2a / 33374 FlyBaseID:FBgn0031381 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_683380.1 Gene:AT1G45015 / 841067 AraportID:AT1G45015 Length:153 Species:Arabidopsis thaliana


Alignment Length:128 Identity:28/128 - (21%)
Similarity:49/128 - (38%) Gaps:19/128 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ALEFSDCG--SKTGKFTRVAIEGCDTTKAECILKRNTTVSFSIDFALAEEATA-VKTVVHGKVLG 79
            |::|..|.  ....|.|:|.|...|.         :|.::.|   .|...... ..|||....:|
plant    24 AVDFKYCNGIGYVDKITKVEISPDDP---------STVITIS---GLTRRGLVYAGTVVVASGIG 76

  Fly    80 IEMPFPLANPDACVDSGLKCPLEKDESYRYT-ATLPVLRSYPKVSVLVKWELQDQDGADIICV 141
             |...|....|.|  ...|||:....::.:| :.:.:.:::....:.|...|..:|..:.:||
plant    77 -EFNIPFKYYDFC--QLCKCPMLSGTNFVFTLSQILIPKAFASDKLAVTLSLISRDQTEGVCV 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2aNP_608637.1 Npc2_like 21..145 CDD:238458 27/125 (22%)
AT1G45015NP_683380.1 ML 27..140 CDD:412276 27/125 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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