DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Npc2a and LOC5667648

DIOPT Version :10

Sequence 1:NP_608637.1 Gene:Npc2a / 33374 FlyBaseID:FBgn0031381 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_001688360.2 Gene:LOC5667648 / 5667648 VectorBaseID:AGAMI1_011668 Length:151 Species:Anopheles gambiae


Alignment Length:145 Identity:47/145 - (32%)
Similarity:65/145 - (44%) Gaps:7/145 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VIACAALVVFAGALEFSDCGSKTGKFTRVAIEGCDTTKAECILKRNTTVSFSIDFALAEEATAVK 70
            :||....||:...  ...|.:...:.|.|.|.||  |...|.|.|...|...|||......|::.
Mosquito     7 LIALVPAVVYGNV--GRACTNGRPQATNVNILGC--TAPPCDLVRGQDVIAYIDFTTDRAVTSMT 67

  Fly    71 TVVHGKVLGIEMPFPLAN--PDACV-DSGLKCPLEKDESYRYTATLPVLRSYPKVSVLVKWELQD 132
            ||.....|||..|:||..  .|.|. ..|..|||..:|...|..|:|||..||.||:.::.::.|
Mosquito    68 TVPTATALGITAPYPLPAEFADTCAWLEGSSCPLSANEDVTYRLTIPVLPIYPLVSLSIEIDIVD 132

  Fly   133 QDGADIICVEIPAKI 147
            |....:.|..:.|::
Mosquito   133 QAENSVSCFVVDARV 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2aNP_608637.1 Npc2_like 21..145 CDD:238458 42/126 (33%)
LOC5667648XP_001688360.2 Npc2_like 21..145 CDD:238458 42/125 (34%)

Return to query results.
Submit another query.