DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2a and Npc2d

DIOPT Version :10

Sequence 1:NP_608637.1 Gene:Npc2a / 33374 FlyBaseID:FBgn0031381 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_649975.1 Gene:Npc2d / 41232 FlyBaseID:FBgn0037782 Length:173 Species:Drosophila melanogaster


Alignment Length:119 Identity:37/119 - (31%)
Similarity:53/119 - (44%) Gaps:8/119 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VAIEGCDTTKAECILKRNTTVSFSIDFALAEEATAVKTVVHGKVLGI-----EMPFPLANPDACV 93
            |.:..|.|  ..|.:.:.||..|.||||:.:..|.:.|:|....|||     |:|..:|.....:
  Fly    42 VRVHNCVT--PPCQIVKGTTQKFEIDFAVDKYITQLTTLVKATTLGIITVPYELPADVAAVCPNL 104

  Fly    94 DSGLKCPLEKDESYRYTATLPVLRSYPKVSVLVKWELQDQDGADIICVEIPAKI 147
            ..|..|||...|...|..|.|: ..||::.|.::..|.|||.....|.....|:
  Fly   105 QYGAYCPLYPTEDVSYLFTFPI-GEYPEIGVKIEIYLVDQDNEIATCFVCDIKV 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2aNP_608637.1 Npc2_like 21..145 CDD:238458 36/115 (31%)
Npc2dNP_649975.1 Npc2_like 29..155 CDD:238458 36/115 (31%)

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