DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2a and LOC1273113

DIOPT Version :10

Sequence 1:NP_608637.1 Gene:Npc2a / 33374 FlyBaseID:FBgn0031381 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_312063.2 Gene:LOC1273113 / 1273113 VectorBaseID:AGAMI1_009599 Length:151 Species:Anopheles gambiae


Alignment Length:141 Identity:47/141 - (33%)
Similarity:65/141 - (46%) Gaps:12/141 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VVFAGALEFSDCGSKTGKF-TRVAIEGCDTTKAECILKRNTTVSFSIDFALAEEATAVKTVVHGK 76
            :|||..:....|  |.|.. ..|.:.||.|  |.|.|.:....:..:||......||:...||..
Mosquito    16 IVFADVVTVHQC--KQGPLPVAVDVTGCRT--APCELPKGQDAAVLVDFTADRHLTALVPKVHAS 76

  Fly    77 VLGIEMPFPLANPDACVDS-----GLKCPLEKDESYRYTATLPVLRSYPKVSVLVKWELQDQDGA 136
            ..|:.:||.|  ||...|.     |..||:.:||...|...||||..||.:|:.|:.:|.|||..
Mosquito    77 FGGVTVPFEL--PDDRKDGCQWLVGGMCPVSRDEDVTYELRLPVLAVYPSMSLTVELQLVDQDNT 139

  Fly   137 DIICVEIPAKI 147
            ...|.::.||:
Mosquito   140 VATCFQLEAKV 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2aNP_608637.1 Npc2_like 21..145 CDD:238458 42/129 (33%)
LOC1273113XP_312063.2 Npc2_like 24..148 CDD:238458 42/129 (33%)

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