DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Got2 and Got1l1

DIOPT Version :9

Sequence 1:NP_722745.1 Gene:Got2 / 33373 FlyBaseID:FBgn0001125 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001014025.2 Gene:Got1l1 / 306540 RGDID:1307172 Length:404 Species:Rattus norvegicus


Alignment Length:379 Identity:111/379 - (29%)
Similarity:196/379 - (51%) Gaps:7/379 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 FKKDTNPKKINLGAGAYRDDNTQPFVLPSVREAEKRVV-SRSLDKEYATIIGIPEFYNKAIELAL 115
            :::|.:..|:.|.......:...|:|...||:...::. ..||:.||..:.|:..|...::||..
  Rat    24 YRQDDSSVKMFLAYKVCMTEGGHPWVSLVVRKTRLQIAEDPSLNYEYLPLAGLKSFIQASLELLF 88

  Fly   116 GKGSKRLAAKHNVTAQSISGTGALRIGAAFLAKFWQGN-REIYIPSPSWGNHVAIFEHAGLPVNR 179
            ||.|:.:..|.......:..:||.::||.|| |.|:.| :.:.|.|........||...|..|..
  Rat    89 GKHSQAIVEKRVGGVHIVGESGAFQLGAQFL-KIWRKNLKTVCIISCQNEQCGLIFRDMGFTVYE 152

  Fly   180 YRYYDKDTCALDFGGLIEDLKKIPEKSIVLLHACAHNPTGVDPTLEQWREISALVKKRNLYPFID 244
            |..::......|....:|.|:.||..||:::    .|.:....|..||.::.:::|.:.::||.|
  Rat   153 YSVWNSTDLCSDPSIFVEVLQHIPAGSILVI----GNISDCRFTQNQWTKLMSIIKSKQIFPFFD 213

  Fly   245 MAYQGFATGDIDRDAQAVRTFEADGHDFCLAQSFAKNMGLYGERAGAFTVLCSDEEEAARVMSQV 309
            :..||.:|||::.|::.::.|.:.|.:|..:||.:||.|:|.|..|...|.....:....|:||:
  Rat   214 IPCQGLSTGDLEEDSKFLQHFVSLGFEFFCSQSLSKNFGIYDEGVGILVVAALSNQHLLCVISQL 278

  Fly   310 KILIRGLYSNPPVHGARIAAEILNNEDLRAQWLKDVKLMADRIIDVRTKLKDNLIKLGSSQNWDH 374
            ...::.|:.|||..||||...||.|..|..:|.:.:|.:.:.|:.::.|:|:.|..||:..:|:|
  Rat   279 MDYVQALWGNPPATGARIITSILCNPALFGEWKQSLKGVVENIMLIKEKVKEKLRLLGTPGSWNH 343

  Fly   375 IVNQIGMFCFTGLKPEQVQKLIKDHSVYLTNDGRVSMAGVTSKNVEYLAESIHK 428
            |..|.|...:.||..:||:.|:|...:||....|::...:.|.|::|:.:|||:
  Rat   344 ITRQSGTHGYLGLNYQQVEFLVKKKHIYLPKTSRINFTCINSSNIDYITQSIHE 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Got2NP_722745.1 AAT_I 21..431 CDD:302748 111/379 (29%)
Aminotran_1_2 58..426 CDD:278580 107/369 (29%)
Got1l1NP_001014025.2 AAT_I 5..399 CDD:418510 111/379 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1448
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104596at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.