DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr62 and Wdr97

DIOPT Version :9

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:XP_006241975.1 Gene:Wdr97 / 500896 RGDID:1562063 Length:1656 Species:Rattus norvegicus


Alignment Length:1133 Identity:203/1133 - (17%)
Similarity:349/1133 - (30%) Gaps:385/1133 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PLASPLTPSPSSVFGSPKFPANYERSEKIKLKKVLGLTVCSNAALDVSPVSGLLAYPAGCTVVLF 94
            |..|||.| |.|:.||.|                     |....||....|.......|..|:.|
  Rat   242 PCGSPLQP-PPSLAGSLK---------------------CLALGLDSDHCSWHCFAAYGSAVLTF 284

  Fly    95 NAKRQTQAYLVNTSRKAFTSVA--FSRCGRYVATGECGINPAIKVWELETPNGSLEHCSGGSVVA 157
            :.....   |:|.|:....::.  ...|....|......:..:||||.:           ..:..
  Rat   285 DLDDWA---LINVSQDLHKTIISDLDYCEEISAMVTASRDSTVKVWEAD-----------WQIRM 335

  Fly   158 EFVDHKYAVTCVAFSPTGKYLVSVGSQHDMIVNVFDWRANLKMA------------SNKISSKVA 210
            .||.|...||.:...|..  .::|.:..|..:..:|.:|..::.            |.|:|..:|
  Rat   336 VFVGHTGPVTAMMVLPNS--TLAVSASQDGTIRTWDLQAEAQVGEVTLDYWTEGIISEKVSRLLA 398

  Fly   211 AVCFSEDGSYFVTVGNRHVKYWYLEGGRKYKDPI-------------PLM--------------- 247
            .   :..|...:::.::.:..|.:   |....|:             |::               
  Rat   399 P---ASPGWPVLSLCSKSIGLWRV---RTLYSPLAQLSAPVLHIQVAPVLPAPTEPSLPARLVCA 457

  Fly   248 -------------GR--SAILGDLRDNDFCAVACGKGICAESTYAITRQGHLVEFSSRR------ 291
                         ||  |::|.:..|   ||......:..|:.:.:||.||||..::.|      
  Rat   458 CADGSVYLVSATTGRTVSSLLLEPED---CAAGVVYCLSREALWVLTRSGHLVRANAARCPMVVV 519

  Fly   292 ---------------------LLDK------WVQCRTTNANCICV--------NERFI-LVGCAE 320
                                 |.|.      |...|....:.|..        ..||: ::|.::
  Rat   520 HRLRPPLPPAPQPCCLHLYSHLTDPRSAFACWEMMRENQGDMIRSAIAWAWKNKNRFLPVMGHSD 584

  Fly   321 SIIRI--FNSATLEYVTTLPRTHYLGVDVAQGIQINHI------MSVPQQAKFP---DCIAMVFD 374
            ..:.:  :.::|..:||   ..|..|...|.|...|.|      ::|.....||   :|::::  
  Rat   585 GTLSVLDWRTSTTIFVT---EAHSPGPVTAIGSTWNSIVTSGADLTVKMWRVFPYAEECLSLL-- 644

  Fly   375 EQRSKVSCVYNDHSLYIWDLRDISRVGKSHSFLYHSTCIWGVETVPYNV---------------E 424
               ...||.:....|.:        :||..:..:...     |:..|.:               :
  Rat   645 ---RTFSCCHPVVMLCV--------LGKRITVGFEDP-----ESATYGLVQFGLGDKMRCDHRPQ 693

  Fly   425 REPSQTLPEEC------FVTCSS-DDTIRVWGLDGCTNNDIYRRNIYSKELLKIVYSD---DELQ 479
            .:|...:...|      ...||| |.|||:|          .|.|:    ||:::..|   ..|.
  Rat   694 DDPMDHITGLCCCPTLKIYACSSLDCTIRIW----------TRENL----LLRLLQLDGPPQALA 744

  Fly   480 FIKDQGSSLFDKAGN-----------SSYDGRNGVRCIK------------------ISPELQHL 515
            |..:.|..:|.....           :||..:.  .|:|                  .|.:||.|
  Rat   745 FSSNNGDLVFSLGARLYTVSYKTYLPTSYLVKK--LCLKTTDVVNDPPLPLTSKKPLTSSQLQRL 807

  Fly   516 ASGDRCGNIRV-----YSLVNLRLLTTIEAHESEVLCLEYSNEKIERKLLASASRDRLI-----H 570
            ||.....::.|     |....:.....::....:::..:...:::.:.|:..|:|..|.     .
  Rat   808 ASLHGAASLSVALPFGYYKTPILQQPVLKEDLEDIIARDQDLQELRQGLVVPAARPPLSPKQRDE 872

  Fly   571 VFDVAQNYLLL----QTLDDHSSSITSIKFVGAGLNFQMISCGADKSIMFRSFQGNIFMRGTNTS 631
            .||   |||.|    :.:.|.||...|.::                                .|:
  Rat   873 AFD---NYLHLIYGSELMMDGSSERESSQW--------------------------------GTA 902

  Fly   632 GKTT------LYDMEVD-SNAKHILTACQDRNVRVYGTQNAKQTKTFKGSHSDEGSLIKLSLDPS 689
            ..:|      :.|||:. ..|..:..|....:::.....:|.||....|........:.|.:.|:
  Rat   903 APSTEKEPPDMADMEIQPGTAAGVGQAALSIDIQAASAPSAPQTPRAPGRRFARPPRVSLPIPPT 967

  Fly   690 GIYVATSCTDKTLAVYDYYSNECMARMYGHSELVTGLKFTNDCRHLISASGDGCIFIWQVPHDM- 753
            ...|.:.            :::.:||.....||..||..                   ||..|. 
  Rat   968 HRKVHSQ------------ASQLLARSSLSYELGLGLDL-------------------QVQWDQF 1001

  Fly   754 -IVTMQARMSQQRLRSGHAPL---PRPLAPISPPDGI--VLESPTSEIEQPQLQPKFGVAERFSD 812
             :.|.....|...::: ..||   .||..|:|...|.  ....|...:.:|...|          
  Rat  1002 GVKTTDLDKSIDYMKN-RVPLLLPRRPAEPLSKLTGFFPATVKPYKLLSRPIRFP---------- 1055

  Fly   813 VGQLP-QWAMRKAAADSDSGALSIPTPSGGSATVPGMHAASSMGNLSSSPSQQMTGLAPRAR--G 874
             |.:| ...:|:....::...|       ||     :....|.....||.|:....|..|.|  .
  Rat  1056 -GCVPNSVVLRQMWLQAEVNCL-------GS-----LEELGSQSKFKSSGSEDDKWLKRRKRSSA 1107

  Fly   875 RW----------AQRSTQLETADDLRSNSESPLGTVSSVGGHSGVNVQTSDYNSASSKDIT---Y 926
            ||          .:|.|..|..::.....|.......|....|.:..:..:.::.|:.|:.   |
  Rat  1108 RWRTKLFGLLRLTRRKTGAEEGEEQEEEEEEVEVEYISSSPASDMEPERWEPDTESTTDLISKFY 1172

  Fly   927 NQTYLSEDSS--IDSGMETRRGEL-KFI 951
            |:|..|:..|  ..|.:|.|.|.| ||:
  Rat  1173 NETSKSKGYSHPRHSLLEDRYGHLPKFL 1200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 73..448 CDD:295369 86/506 (17%)
WD40 repeat 73..107 CDD:293791 7/33 (21%)
WD40 repeat 113..161 CDD:293791 7/49 (14%)
WD40 158..574 CDD:225201 98/587 (17%)
WD40 repeat 167..207 CDD:293791 8/51 (16%)
WD40 repeat 209..285 CDD:293791 18/118 (15%)
WD40 repeat 254..294 CDD:293791 12/66 (18%)
WD40 repeat 303..338 CDD:293791 7/45 (16%)
WD40 repeat 353..407 CDD:293791 11/62 (18%)
WD40 385..747 CDD:225201 70/436 (16%)
WD40 436..748 CDD:295369 63/365 (17%)
WD40 repeat 505..540 CDD:293791 10/57 (18%)
WD40 repeat 546..586 CDD:293791 10/48 (21%)
WD40 repeat 591..631 CDD:293791 1/39 (3%)
WD40 repeat 637..672 CDD:293791 8/35 (23%)
WD40 repeat 679..717 CDD:293791 5/37 (14%)
WD40 repeat 723..749 CDD:293791 2/25 (8%)
Wdr97XP_006241975.1 WD40 <205..380 CDD:295369 36/175 (21%)
WD40 repeat 247..273 CDD:293791 11/47 (23%)
WD40 291..768 CDD:225201 90/533 (17%)
WD40 299..632 CDD:295369 58/357 (16%)
WD40 repeat 304..339 CDD:293791 7/45 (16%)
WD40 repeat 344..377 CDD:293791 7/34 (21%)
WD40 repeat 385..430 CDD:293791 8/50 (16%)
WD40 repeat 564..602 CDD:293791 6/40 (15%)
WD40 repeat 610..648 CDD:293791 8/42 (19%)
WD40 repeat 655..692 CDD:293791 5/49 (10%)
WD40 repeat 700..746 CDD:293791 15/59 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337026
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.