Sequence 1: | NP_001259886.1 | Gene: | Wdr62 / 33367 | FlyBaseID: | FBgn0031374 | Length: | 2397 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001032880.2 | Gene: | Wdr43 / 362703 | RGDID: | 1565005 | Length: | 674 | Species: | Rattus norvegicus |
Alignment Length: | 814 | Identity: | 138/814 - (16%) |
---|---|---|---|
Similarity: | 257/814 - (31%) | Gaps: | 299/814 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 436 FVTCSSDDTIRVWGLDGCTNNDIYRRNIYSKEL----LKIVYSDDELQFIKDQGSSLFDKAGNSS 496
Fly 497 YDGRNGVRCIKISPELQHLASGDRCGNIRVYSLVNLRLLTTI--EAHESEVLCLEY--------- 550
Fly 551 -SNEKI-----------------------------ERKLLASASRDRLIHVFDVAQNYLLLQTLD 585
Fly 586 DHSSSITSIKFVGAGLNFQMISCGADKSIMFRSFQGNIFMRGTNTSGKTTLYDMEVDSNAKHILT 650
Fly 651 ACQDR--NVRVYGTQNAKQTKTFKGSHSDEGSLIKLSLDPS---GIYVATSCTDKTLAVYDYYSN 710
Fly 711 ECMARMYGHSELVTGLKFTNDCRHLISASGDGCIFIWQVPHDMIVTMQARMSQQRLRSGHAPLPR 775
Fly 776 PLAPISPPDGIVLE------------SPTSEIEQPQLQPK--FGVAERFSDVGQLPQWAMRKAAA 826
Fly 827 DSDSGALSIPTPSGGSAT------VPGMHA--------------ASSMGNLSSSPSQQMTGLAPR 871
Fly 872 ARGRWAQRSTQLET-------ADDLRSNS---------------------ESPLGTV-------- 900
Fly 901 SSVGGHSGVNVQTSDYNSASSKDITYNQTYLS-------EDSSIDSGMETRRGELKFIGSSNNGT 958
Fly 959 VVTVSSVSSIAVSASNGAMSTGSGAAQQRLQLPDKRLKPGLRFDTHTHDHDGDVEDISDGERTSS 1023
Fly 1024 DHGMFYNNLAPSTPTDFKVTAMNEDELRKSVRRQKFEKSGLQLTPSALSGNGSSHTASTGTGTSD 1088
Fly 1089 TE-DEGSTPSAENAERSLASTLGGSSENLPQSST 1121 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Wdr62 | NP_001259886.1 | WD40 | 73..448 | CDD:295369 | 5/11 (45%) |
WD40 repeat | 73..107 | CDD:293791 | |||
WD40 repeat | 113..161 | CDD:293791 | |||
WD40 | 158..574 | CDD:225201 | 37/182 (20%) | ||
WD40 repeat | 167..207 | CDD:293791 | |||
WD40 repeat | 209..285 | CDD:293791 | |||
WD40 repeat | 254..294 | CDD:293791 | |||
WD40 repeat | 303..338 | CDD:293791 | |||
WD40 repeat | 353..407 | CDD:293791 | |||
WD40 | 385..747 | CDD:225201 | 66/360 (18%) | ||
WD40 | 436..748 | CDD:295369 | 66/361 (18%) | ||
WD40 repeat | 505..540 | CDD:293791 | 10/36 (28%) | ||
WD40 repeat | 546..586 | CDD:293791 | 10/78 (13%) | ||
WD40 repeat | 591..631 | CDD:293791 | 7/39 (18%) | ||
WD40 repeat | 637..672 | CDD:293791 | 6/36 (17%) | ||
WD40 repeat | 679..717 | CDD:293791 | 7/40 (18%) | ||
WD40 repeat | 723..749 | CDD:293791 | 3/25 (12%) | ||
Wdr43 | NP_001032880.2 | WD40 | 19..271 | CDD:295369 | 54/291 (19%) |
WD40 | <19..217 | CDD:225201 | 40/205 (20%) | ||
WD40 repeat | 19..57 | CDD:293791 | 10/30 (33%) | ||
WD40 repeat | 63..124 | CDD:293791 | 14/72 (19%) | ||
WD40 repeat | 129..165 | CDD:293791 | 4/35 (11%) | ||
WD40 repeat | 172..205 | CDD:293791 | 7/35 (20%) | ||
WD40 repeat | 211..261 | CDD:293791 | 13/81 (16%) | ||
WD40 repeat | 270..317 | CDD:293791 | 11/57 (19%) | ||
Utp12 | 473..569 | CDD:281932 | 13/98 (13%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166337023 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |