DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr62 and POC1B

DIOPT Version :9

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:NP_758440.1 Gene:POC1B / 282809 HGNCID:30836 Length:478 Species:Homo sapiens


Alignment Length:561 Identity:104/561 - (18%)
Similarity:196/561 - (34%) Gaps:145/561 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 DHSLYIWDLRDISRVGKSHSFLYHSTCIWGVETVPYNVEREPSQTLPEECFVTCSSDDTIRVWGL 450
            |..|.:|:.:..:|   ::.::.|...:..|:..|:.           ....:.|.|.|:|:|  
Human    39 DTFLMLWNFKPHAR---AYRYVGHKDVVTSVQFSPHG-----------NLLASASRDRTVRLW-- 87

  Fly   451 DGCTNNDIYRRNIYSKELLKIVYSDDELQFIKDQGSSLFDKAGN-SSYDGRNG-VRCIKISPELQ 513
                                                 :.||.|. |.:..... ||.:..|.:.|
Human    88 -------------------------------------IPDKRGKFSEFKAHTAPVRSVDFSADGQ 115

  Fly   514 HLASGDRCGNIRVYSLVNLRLLTTIEAHESEVLCLEYSNEKIERKLLASASRDRLIHVFDVAQNY 578
            .||:.....:|:|:|:...|.|.::..|...|.|.::|.   :.:|:.|.|.|:.|.::|.... 
Human   116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP---DGRLIVSCSEDKTIKIWDTTNK- 176

  Fly   579 LLLQTLDDHSSSITSIKFVGAGLNFQMISCGADKSIMFRSFQGNIFMRGTNTSGKTTLYDMEVDS 643
               |.:::.|.|:....||    :|                         |.||..         
Human   177 ---QCVNNFSDSVGFANFV----DF-------------------------NPSGTC--------- 200

  Fly   644 NAKHILTACQDRNVRVYGTQNAKQTKTFKGSHSDEGSLIKLSLDPSGIYVATSCTDKTLAVYDYY 708
                |.:|..|:.|:|:..:..|..:.:: .||  |.:..:|..|||.|:.|:.:|.||.:.|..
Human   201 ----IASAGSDQTVKVWDVRVNKLLQHYQ-VHS--GGVNCISFHPSGNYLITASSDGTLKILDLL 258

  Fly   709 SNECMARMYGHSELVTGLKFTNDCRHLISASGDGCIFIWQVPHDMIVTMQARMSQQRLRSGHAPL 773
            ....:..:.||:..|..:.|:.......|...|..:.:|:...|.:..  ..::::.|:..|...
Human   259 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHC--KGLTKRNLKRLHFDS 321

  Fly   774 PRPLAPISPPDGIVLESP---TSEIEQPQLQPKFGVAERFSDVGQLPQWAMRKAAADSDSGALSI 835
            |..|..|.|      .:|   ..::|..::.||..|.:.......:.......:...:::...::
Human   322 PPHLLDIYP------RTPHPHEEKVETVEINPKLEVIDLQISTPPVMDILSFDSTTTTETSGRTL 380

  Fly   836 P---TPSGGSATVPGMHAASSMGNLSSSPSQQMTGLAPRARGRWAQRSTQLETADDLRSNSESPL 897
            |   ..:.|....|.:.:...:...:...::.|:.|...     :|||..|...|.|....|.  
Human   381 PDKGEEACGYFLNPSLMSPECLPTTTKKKTEDMSDLPCE-----SQRSIPLAVTDALEHIMEQ-- 438

  Fly   898 GTVSSVGGHSGVNVQTSDYNSASSKDITYNQTYLSEDSSID 938
                       :||.|      .:..|...:..|:||...|
Human   439 -----------LNVLT------QTVSILEQRLTLTEDKLKD 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 73..448 CDD:295369 11/61 (18%)
WD40 repeat 73..107 CDD:293791
WD40 repeat 113..161 CDD:293791
WD40 158..574 CDD:225201 36/189 (19%)
WD40 repeat 167..207 CDD:293791
WD40 repeat 209..285 CDD:293791
WD40 repeat 254..294 CDD:293791
WD40 repeat 303..338 CDD:293791
WD40 repeat 353..407 CDD:293791 4/20 (20%)
WD40 385..747 CDD:225201 71/362 (20%)
WD40 436..748 CDD:295369 64/313 (20%)
WD40 repeat 505..540 CDD:293791 9/34 (26%)
WD40 repeat 546..586 CDD:293791 9/39 (23%)
WD40 repeat 591..631 CDD:293791 4/39 (10%)
WD40 repeat 637..672 CDD:293791 6/34 (18%)
WD40 repeat 679..717 CDD:293791 11/37 (30%)
WD40 repeat 723..749 CDD:293791 5/25 (20%)
POC1BNP_758440.1 WD40 10..298 CDD:238121 71/363 (20%)
WD 1 16..55 4/18 (22%)
WD40 repeat 21..58 CDD:293791 4/21 (19%)
WD 2 58..99 12/90 (13%)
WD40 repeat 63..100 CDD:293791 11/86 (13%)
WD 3 101..139 11/37 (30%)
WD40 repeat 106..142 CDD:293791 10/35 (29%)
WD 4 142..181 11/45 (24%)
WD40 repeat 147..182 CDD:293791 10/41 (24%)
WD 5 183..223 14/81 (17%)
WD40 repeat 190..225 CDD:293791 12/76 (16%)
WD 6 226..265 13/40 (33%)
WD40 repeat 231..267 CDD:293791 10/35 (29%)
WD 7 268..307 8/40 (20%)
WD40 repeat 273..299 CDD:293791 5/25 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143282
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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