Sequence 1: | NP_001259886.1 | Gene: | Wdr62 / 33367 | FlyBaseID: | FBgn0031374 | Length: | 2397 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_493453.1 | Gene: | F47G4.4 / 173271 | WormBaseID: | WBGene00009825 | Length: | 722 | Species: | Caenorhabditis elegans |
Alignment Length: | 542 | Identity: | 101/542 - (18%) |
---|---|---|---|
Similarity: | 195/542 - (35%) | Gaps: | 137/542 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 534 LLTTIEAHESEVLCLEYSNEKIERKLLASASRDRLIHVFDVAQNYLLLQTLDDHSSSITSIKFVG 598
Fly 599 AGLNFQMISCGADKSIMFRSFQGN----------------IFMRGTNTSGKTTLYDMEVDSNAKH 647
Fly 648 ILTACQDRNVRVYGTQNAKQTKTFKGS-HSDEGSLIKLSLDPSGIYVATSCTDKTLAVYDYYSNE 711
Fly 712 CMARMYGHSELVTGLKFTNDCRHLISASGDGC-IFIWQVPHDMIVTMQARM-------------- 761
Fly 762 -------SQQRLRS---------GHAPLPRPLAPISPPDGIVLESPTSEIEQ-PQLQPKFGVAER 809
Fly 810 FSDVGQLPQWAMRKAAADSDSGALSIPTPSGGSA------TVPGMHAASSMGNLSSSPSQQMTGL 868
Fly 869 APRARGRWAQRSTQLETADDLRSNSESPLGTVSSVGGHSGVNVQTSDYNSASSKDITYNQ----- 928
Fly 929 TYLSEDSSIDSGMETRRGE----LKFIG---SSNNGTVV-TVSSVSS------------------ 967
Fly 968 --IAVSASNGAMSTGSGAAQQR 987 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Wdr62 | NP_001259886.1 | WD40 | 73..448 | CDD:295369 | |
WD40 repeat | 73..107 | CDD:293791 | |||
WD40 repeat | 113..161 | CDD:293791 | |||
WD40 | 158..574 | CDD:225201 | 10/39 (26%) | ||
WD40 repeat | 167..207 | CDD:293791 | |||
WD40 repeat | 209..285 | CDD:293791 | |||
WD40 repeat | 254..294 | CDD:293791 | |||
WD40 repeat | 303..338 | CDD:293791 | |||
WD40 repeat | 353..407 | CDD:293791 | |||
WD40 | 385..747 | CDD:225201 | 41/230 (18%) | ||
WD40 | 436..748 | CDD:295369 | 41/231 (18%) | ||
WD40 repeat | 505..540 | CDD:293791 | 2/5 (40%) | ||
WD40 repeat | 546..586 | CDD:293791 | 9/39 (23%) | ||
WD40 repeat | 591..631 | CDD:293791 | 9/55 (16%) | ||
WD40 repeat | 637..672 | CDD:293791 | 3/34 (9%) | ||
WD40 repeat | 679..717 | CDD:293791 | 6/37 (16%) | ||
WD40 repeat | 723..749 | CDD:293791 | 6/26 (23%) | ||
F47G4.4 | NP_493453.1 | WD40 | <54..317 | CDD:225201 | 48/295 (16%) |
WD40 | 54..>236 | CDD:295369 | 37/214 (17%) | ||
WD40 repeat | 56..91 | CDD:293791 | 9/39 (23%) | ||
WD40 repeat | 96..132 | CDD:293791 | 8/51 (16%) | ||
WD40 repeat | 140..174 | CDD:293791 | 3/34 (9%) | ||
WD40 repeat | 177..207 | CDD:293791 | 6/36 (17%) | ||
WD40 repeat | 215..258 | CDD:293791 | 8/44 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |