DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr62 and WDR88

DIOPT Version :9

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:NP_775750.3 Gene:WDR88 / 126248 HGNCID:26999 Length:472 Species:Homo sapiens


Alignment Length:464 Identity:86/464 - (18%)
Similarity:164/464 - (35%) Gaps:169/464 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 TLPRTHYLGVDVAQGIQIN-----HIMSVPQQAKFPDCIAMVFDEQRSKVSCVYNDHSLYIWDLR 395
            ::|.||.|.  ....:.::     |::  |::.:.|:.:                     ||..:
Human    48 SIPHTHLLA--TLDPLALDREPPPHLL--PEKHQVPEKL---------------------IWGDQ 87

  Fly   396 D-ISRV------GKSHSFLYHSTCIWGVE---------------------TVPYNVEREPSQTLP 432
            | :|::      |..|:.   |||.:.|:                     :|..:.|..|...: 
Human    88 DPLSKIPFKILSGHEHAV---STCHFCVDDTKLLSGSYDCTVKLWDPVDGSVVRDFEHRPKAPV- 148

  Fly   433 EECFVT--------CSSDDTIRVWGLDGCTNNDIYRRNIYSKELLKIVYSDDELQFIKDQGSSLF 489
            .||.:|        .|.|.|:|.|.|:            ..|.|.|:.|.    .||        
Human   149 VECSITGDSSRVIAASYDKTVRAWDLE------------TGKLLWKVRYD----TFI-------- 189

  Fly   490 DKAGNSSYDGRNGVRCIKISPELQHLASG-DRCGNIRVYSLVNLRLLTTIEAHESEVL---CLEY 550
                         |.| |.||:.:::.|| |....|.:....|:..::.|:.|.:..:   |.:.
Human   190 -------------VSC-KFSPDGKYVVSGFDVDHGICIMDAENITTVSVIKDHHTRSITSCCFDP 240

  Fly   551 SNEKIERKLLASASRDRLIHVFDVAQNYLLLQTLDDHSSSITSIKFVGAGLNFQMISCGADKSIM 615
            .::::     ||.|.||.|.::||.....||.....||::|::..|                   
Human   241 DSQRV-----ASVSLDRCIKIWDVTSQATLLTITKAHSNAISNCCF------------------- 281

  Fly   616 FRSFQGNIFMRGTNTSGKTTLYDMEVDSNAKHILTACQDRNVRVYGT-----QNAKQTKTFKGSH 675
              :|.|:.                        :.|:..|:|::::..     :|.....|....|
Human   282 --TFSGHF------------------------LCTSSWDKNLKIWNVHTGEFRNCGACVTLMQGH 320

  Fly   676 SDEGSLIKLSLDPSGIYVATSCTDKTLAVYDYYSNECMARMYGHSELVTGLKFTNDCRHLISASG 740
              |||:..........::.:...|:|:|::|.........:.||::.|..:..:|:.:.::|||.
Human   321 --EGSVSSCHFARDSSFLISGGFDRTVAIWDVAEGYRKLSLKGHNDWVMDVAISNNKKWILSASK 383

  Fly   741 DGCIFIWQV 749
            |..:.:|.:
Human   384 DRTMRLWNI 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 73..448 CDD:295369 27/152 (18%)
WD40 repeat 73..107 CDD:293791
WD40 repeat 113..161 CDD:293791
WD40 158..574 CDD:225201 54/282 (19%)
WD40 repeat 167..207 CDD:293791
WD40 repeat 209..285 CDD:293791
WD40 repeat 254..294 CDD:293791
WD40 repeat 303..338 CDD:293791 0/1 (0%)
WD40 repeat 353..407 CDD:293791 9/65 (14%)
WD40 385..747 CDD:225201 78/406 (19%)
WD40 436..748 CDD:295369 63/328 (19%)
WD40 repeat 505..540 CDD:293791 10/35 (29%)
WD40 repeat 546..586 CDD:293791 11/42 (26%)
WD40 repeat 591..631 CDD:293791 4/39 (10%)
WD40 repeat 637..672 CDD:293791 5/39 (13%)
WD40 repeat 679..717 CDD:293791 6/37 (16%)
WD40 repeat 723..749 CDD:293791 7/25 (28%)
WDR88NP_775750.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
WD40 96..391 CDD:238121 74/388 (19%)
WD40 97..>398 CDD:225201 75/390 (19%)
WD 1 100..139 7/41 (17%)
WD40 repeat 106..142 CDD:293791 5/35 (14%)
WD 2 143..182 12/51 (24%)
WD40 repeat 148..181 CDD:293791 10/45 (22%)
WD 3 184..224 13/65 (20%)
WD40 repeat 190..226 CDD:293791 10/36 (28%)
WD 4 228..267 11/43 (26%)
WD40 repeat 233..270 CDD:293791 11/41 (27%)
WD 5 271..310 9/83 (11%)
WD40 repeat 276..317 CDD:293791 9/85 (11%)
WD 6 319..358 8/40 (20%)
WD40 repeat 324..348 CDD:293791 3/23 (13%)
WD 7 361..400 9/32 (28%)
WD40 repeat 366..390 CDD:293791 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 447..472
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143285
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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