DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr62 and mapkbp1

DIOPT Version :10

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:XP_002933767.2 Gene:mapkbp1 / 100495737 XenbaseID:XB-GENE-485536 Length:1583 Species:Xenopus tropicalis


Alignment Length:1891 Identity:591/1891 - (31%)
Similarity:846/1891 - (44%) Gaps:479/1891 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LTPSPSSVFGSPKFPANYER-SEKIKLKKVLGLTVCSNAALDVSPVSGLLAYPAGCTVVLFNAKR 98
            |..|||......|..|..|. ..|:.|:||||:||.:...|...|.:||:||||||.|||.|.::
 Frog    17 LLRSPSIKLRRHKAGAKKEDIGTKVTLEKVLGITVTAGRGLSCDPKTGLVAYPAGCVVVLLNPRK 81

  Fly    99 QTQAYLVNTSRKAFTSVAFSRCGRYVATGECGINPAIKVWELETPNGSLEHCSGGSVVAEFVDHK 163
            ..|.:::|:|||..|::|||..|:::.|||.|..||::||::          :..:.|||..:||
 Frog    82 NKQQHILNSSRKTITALAFSPDGKFLVTGESGHMPAVRVWDV----------AERTQVAELQEHK 136

  Fly   164 YAVTCVAFSPTGKYLVSVGSQHDMIVNVFDWRANLKMASNKISSKVAAVCFSEDGSYFVTVGNRH 228
            |.|.|||||||.||:||||.||||||||:.|:.|:.:|:||:||||.||.||||.|||||.||||
 Frog   137 YGVACVAFSPTSKYIVSVGYQHDMIVNVWSWKKNVVVAANKVSSKVTAVSFSEDSSYFVTAGNRH 201

  Fly   229 VKYWYLEGGR--KYKDPIPLMGRSAILGDLRDNDFCAVACGKGICAESTYAITRQGHLVEFSSRR 291
            ||:|||:..:  |....|||:|||.:||:||:|.|..||||||..:.||:.||..|.|.||:.:|
 Frog   202 VKFWYLDEAKSSKVNSTIPLLGRSGLLGELRNNFFTDVACGKGKKSNSTFCITSSGLLCEFNDQR 266

  Fly   292 LLDKWVQCRTTNANCICVNERFILVGCAESIIRIFNSATLEYVTTLPRTHYLGVDVAQGIQINHI 356
            ||||||:.|||.||||.||..:|..|||:..:||||...|.:::|:|:.|.||||:|...:.:.:
 Frog   267 LLDKWVELRTTVANCILVNHEYIFCGCADGTVRIFNPNNLHFLSTMPKPHCLGVDIATVTEASRL 331

  Fly   357 MSVPQQAKFPDCIAMVFDEQRSKVSCVYNDHSLYIWDLRDISRVGKSHSFLYHSTCIWGVETVPY 421
            .|....||:||.|||.||.....:||||||||||:||::|:.:|||.:|.||||:|:|.||..| 
 Frog   332 FSSAADAKYPDTIAMTFDPTNQWLSCVYNDHSLYVWDVKDLKKVGKVYSALYHSSCVWSVEIYP- 395

  Fly   422 NVEREPSQTLPEECFVTCSSDDTIRVWGLDGCTNN---DIYRRNIYSKELLKIVYSDDELQFIKD 483
            .::......||...|:|||||.|||:|.::  |:|   ....|||.|.:|:|||..||..|.:.|
 Frog   396 EIKDSNQACLPPNSFITCSSDSTIRLWNME--TSNIHGTALHRNILSNDLMKIVLIDDNTQALLD 458

  Fly   484 ---QGSSLFDKAGNSSYDGRNGVRCIKISPELQHLASGDRCGNIRVYSLVNLRLLTTIEAHESEV 545
               ..:.|.||..:...|.:.|:|.:.:||..||||||||.|.:||:.|..:..|..:|||:||:
 Frog   459 TEYNSAGLGDKVDHQGLDTKVGIRSVCVSPNGQHLASGDRTGTLRVHELQTVTELLKVEAHDSEI 523

  Fly   546 LCLEYSNEKIERKLLASASRDRLIHVFDVAQNYLLLQTLDDHSSSITSIKFVGAGLNFQMISCGA 610
            ||||||.......|||||||||||||.|.|::|.|.|||||||||||::||.......:||||||
 Frog   524 LCLEYSKPDTGFNLLASASRDRLIHVLDAAKDYSLQQTLDDHSSSITAVKFAANDGKVRMISCGA 588

  Fly   611 DKSIMFRSFQ--GNIFMRGTNTS---GKTTLYDMEVDSNAKHILTACQDRNVRVYGTQNAKQTKT 670
            ||||.||:..  |:..:..|.|.   .|||||||:||.:.|:....|||||:|::...:.||.|.
 Frog   589 DKSIYFRTADKVGDAAVHFTRTHHIVRKTTLYDMDVDPSLKYAAIGCQDRNIRIFNISSGKQKKL 653

  Fly   671 FKGSHSDEGSLIKLSLDPSGIYVATSCTDKTLAVYDYYSNECMARMYGHSELVTGLKFTNDCRHL 735
            :|||.|::|:|||:..||||:|:||||:||.|:::|:||.||:|.|:||||:|||:||||||:||
 Frog   654 YKGSQSEDGTLIKVQTDPSGLYIATSCSDKNLSIFDFYSGECVATMFGHSEIVTGMKFTNDCKHL 718

  Fly   736 ISASGDGCIFIWQVPHDMIVTMQARMSQQRLRSGHAPLPRP----------LAPISPPDGIVLES 790
            ||.|||.|||||::..:|.:.|:.|:::.|.|.....:..|          :|.:|....:..:|
 Frog   719 ISVSGDSCIFIWRLSSEMTINMRQRLAEVRQRGKQVEMSAPHKTPNARRETIAVMSTAPAMSSDS 783

  Fly   791 PTSEIEQPQLQPKFG---VAERFSDVGQ-LPQWAMRKAAADSDSGALSIPTPSGGSATVPGMHAA 851
            ....:|....:...|   .:...|..|: |..|.|::                       |.:|:
 Frog   784 DKEGVEDGSDEDMAGSDKTSSASSSFGRSLSYWEMKR-----------------------GTNAS 825

  Fly   852 SSMGNLSSSPSQQMTGLAPRARGRWAQRSTQLETADDLRSNSESPLGTVSSVGGHSGVNVQTSDY 916
            |...:..|.        .||.|.||:|.:..:|.             ||.|:     ::::..| 
 Frog   826 SERSDCLSK--------MPRQRVRWSQPAGNIEM-------------TVKSM-----LDLRQLD- 863

  Fly   917 NSASSKDITYNQTYLSEDSSIDSGMETRRGELKFIGSSNNGTVVTVSSVSSIAVSASNGAMSTGS 981
            :.|.|.|:      :....|...|||       |:.:.|..:            .|..|.:...|
 Frog   864 SFAPSDDV------IGFQPSEGLGME-------FVDTDNPRS------------QAPFGPIGNRS 903

  Fly   982 GAAQQRLQLPDKRLKPGLRFDTHTHDHDGDVEDISDGERTSSDHGMFYNNLAPSTPTDFKVTAMN 1046
            .....||.                                |.:..||..::  .||...:.|...
 Frog   904 RPRVIRLM--------------------------------SCEETMFKQDV--DTPEGKECTIFP 934

  Fly  1047 EDELRKSVRR-QKFEKSGLQL------------TP-SALSGNGSSHTA---------------ST 1082
            |.|..:|:.| ..||..||.|            :| ||.|.:.||..:               |.
 Frog   935 ETEEDESLDRCSIFEVKGLPLRSYHDNVCQEKHSPDSACSVDYSSRLSSPEHPNEDSESTEPLSV 999

  Fly  1083 GTGTSDTED--------------EGSTPSAENAERSLASTLGGSSENLPQSSTNSFLHAALPEGP 1133
            ...:||.|:              :|..|...:.|:.|....|    ||   ||.:|     |:||
 Frog  1000 DANSSDLEEQVEAEDLEPNSPLMDGEIPQTPDQEKFLKRHFG----NL---STGNF-----PDGP 1052

  Fly  1134 GLTTPMERGGSSRRSISAKHNTENGKSVAAPPTITKSYT---STKKEELLQVINKVKQQLE---N 1192
            .||:  ||...|  |||::...:     |.||.:.:..:   |....|....:.:..|:|.   |
 Frog  1053 LLTS--ERNDFS--SISSRFLAK-----AQPPALGRHQSIEPSVPDSEFSPALFQPSQELPTLIN 1108

  Fly  1193 GTRKNGNTRLNAIAEVGHRPLRGSHSISDLSLAANLDGSRNAGGGPGRYQKPVDSHDTSQYTSPQ 1257
            ||              .|:|          ..|..||                  ||   :.|||
 Frog  1109 GT--------------DHQP----------KSAIMLD------------------HD---FASPQ 1128

  Fly  1258 NTTATAAPTNTQQQIQPPVQQQYQIPKEPHQQAQQQH-QQYAPPASQQFFNCAAPKSKLQQNFQT 1321
                                      |..:.|.:::| |:|.      ......|.|.|.|    
 Frog  1129 --------------------------KFNYFQRKRKHLQEYG------HIGKGGPFSSLMQ---- 1157

  Fly  1322 MRQVQQHYPPYPHHVGVHQIHPPPGVPFGGSAAGSTSAMRSHSQPQNRQQQQQQQQQRAKRNPAG 1386
            :|:.|          .||.:     |..|...|.:...::..||.|...:::::..:|       
 Frog  1158 IRKTQ----------SVHDL-----VHEGDKTAANGGVVKMRSQVQTAAEREEKAIRR------- 1200

  Fly  1387 NNRRTPSILKHYKSCPVSPVHEEVEWSAEGNERGALLGEPKRHSVYADDARTILDMIHADTEKMI 1451
              |..||.|...::......|.:...||:|                    |:.::    .|...:
 Frog  1201 --RTLPSNLIKVENITSGTPHAKDGKSAKG--------------------RSYMN----PTTSSM 1239

  Fly  1452 DEITRKYGDLDEPGIPASYSMPANL-------RNLGGLGSTGDSTPTGRTTQYYVYREFYQCERK 1509
            .:|:|            |.|:..||       .:|...|.....:.||..|......:..|..::
 Frog  1240 AKISR------------SMSVGENLDIGDNQDTSLSSDGKGNCESETGAVTSLIETEKNRQTAKE 1292

  Fly  1510 -VSLSDILQPEQFAASQRRLDEARFLETQRHSSASFFLTGQQSQESLSLLSDGDGPGSYCNSLES 1573
             |.:...|||....:|.:..        |..:.|...|...:......|||...|.|..  .:||
 Frog  1293 TVIIKPHLQPVTNCSSTKTF--------QAKNRAHLTLDIAKPLPDRPLLSFNKGKGQL--EMES 1347

  Fly  1574 VLSDESDCQSAPLEYPQTQVAVLQQRHAGIRNFIIHGPV-----SKSYG------------NSPN 1621
            ..|..:.|:   ::...|::....:.|:.       |.|     |:.||            :.||
 Frog  1348 PRSPANSCK---VKNSFTELTCRNENHSS-------GAVEKISPSEDYGCGKSKDDDVKANSKPN 1402

  Fly  1622 ----AYGSFDYYMRQQH-------STTTDSFDVTGYNLEPLKP-LPSSKTYP----------RIA 1664
                |...|...::..|       ..|.|..  :|...||::| .||....|          ...
 Frog  1403 LSQEAAELFSDLLKPIHRGRAFTIGHTPDHH--SGLCSEPIRPRSPSLNAAPTQNSASSVSFEQC 1465

  Fly  1665 QVQASENIPTLRSKNKQYTSGVNKSLSTDFAQQR-------------------QQRNSNP----- 1705
            ::.|||...:||.....|.|......||:..:.:                   ::.|.:|     
 Frog  1466 ELIASELQDSLRKALSLYRSVTTADPSTNLERCKIAGLLTETFGMVKRELDFLKEGNGSPGTGEA 1530

  Fly  1706 ----MQSGDNLFVRKPLKPKPPVPAKPHNLVSTLSHMEKQQKQKSQSRTASVVQQF-EHNLQKFE 1765
                ..:|.||     ..|..|.....|.|              ...:|.:::||: |..||..|
 Frog  1531 LTPLNDTGSNL-----TAPSLPEEHTTHRL--------------GDDKTLALLQQYSELLLQAVE 1576

  Fly  1766 KEKQRE 1771
            |...::
 Frog  1577 KRMDKK 1582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 <73..236 CDD:441893 89/162 (55%)
WD40 repeat 73..107 CDD:293791 15/33 (45%)
WD40 repeat 113..161 CDD:293791 16/47 (34%)
WD40 156..573 CDD:475233 224/424 (53%)
WD40 repeat 167..207 CDD:293791 26/39 (67%)
WD40 repeat 209..285 CDD:293791 45/77 (58%)
WD40 repeat 303..338 CDD:293791 16/34 (47%)
WD40 repeat 353..407 CDD:293791 27/53 (51%)
WD40 <437..750 CDD:441893 171/323 (53%)
WD40 repeat 505..540 CDD:293791 15/34 (44%)
WD40 repeat 546..586 CDD:293791 26/39 (67%)
WD40 repeat 591..631 CDD:293791 18/41 (44%)
WD40 repeat 637..672 CDD:293791 15/34 (44%)
WD40 repeat 679..717 CDD:293791 22/37 (59%)
WD40 repeat 723..749 CDD:293791 21/25 (84%)
mapkbp1XP_002933767.2 WD40 <65..553 CDD:441893 254/500 (51%)
WD40 repeat 95..134 CDD:293791 16/48 (33%)
WD40 repeat 140..178 CDD:293791 25/37 (68%)
WD40 repeat 182..229 CDD:293791 28/46 (61%)
WD40 repeat 237..313 CDD:293791 40/75 (53%)
WD40 <345..734 CDD:441893 204/391 (52%)
WD40 repeat 345..383 CDD:293791 21/37 (57%)
WD40 repeat 433..474 CDD:293791 15/40 (38%)
WD40 repeat 483..518 CDD:293791 15/34 (44%)
WD40 repeat 524..564 CDD:293791 26/39 (67%)
WD40 repeat 569..610 CDD:293791 18/40 (45%)
WD40 repeat 620..655 CDD:293791 15/34 (44%)
WD40 repeat 662..700 CDD:293791 22/37 (59%)
WD40 repeat 706..732 CDD:293791 21/25 (84%)

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