| Sequence 1: | NP_001259886.1 | Gene: | Wdr62 / 33367 | FlyBaseID: | FBgn0031374 | Length: | 2397 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002729827.2 | Gene: | Poc1b / 100362836 | RGDID: | 2323942 | Length: | 477 | Species: | Rattus norvegicus |
| Alignment Length: | 534 | Identity: | 101/534 - (18%) |
|---|---|---|---|
| Similarity: | 181/534 - (33%) | Gaps: | 140/534 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 366 PDCIAMVFDEQRSKVSCVYNDHSLYIWDLRDISRVGKSHSFLYHSTCIWGVETVPYNVEREPSQT 430
Fly 431 LPEECFVTCSSDDTIRVWGLDGCTNNDIYRRNIYSKELLKIVYSDDELQFIKDQGSSLFDKAGNS 495
Fly 496 SYDGRNGVRCIKISPELQHLASGDRCGNIRVYSLVNLRLLTTIEAHESEVLCLEYSNEKIERKLL 560
Fly 561 ASASRDRLIHVFDVAQNYLLLQTLDDHSSSITSIKFVGAGLNFQMI-SCGADKSIMFRSFQGNIF 624
Fly 625 MRGTNTSGKTTLYDMEVDSNAKHI-LTACQDRNVRVYGTQNAKQTKTFKGSHSDEGSLIKLSLDP 688
Fly 689 SGIYVATSCTDKTLAVYDYYSNECMARMYGHSELVTGLKFTNDCRHLISASGDGCIFIWQVPHDM 753
Fly 754 IVTMQARMSQQRLRSGHAPLPRPLAPISP--PDGIVLESPTSEIEQPQLQPKFGVAERFSDVGQL 816
Fly 817 PQWAMRKAAADSDSGALSIPTPSGGSATV------PGMHAASSMGNLSSSPSQQMTGLAPRARGR 875
Fly 876 WAQRSTQLETADDL 889 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Wdr62 | NP_001259886.1 | WD40 | 73..448 | CDD:295369 | 13/81 (16%) |
| WD40 repeat | 73..107 | CDD:293791 | |||
| WD40 repeat | 113..161 | CDD:293791 | |||
| WD40 | 158..574 | CDD:225201 | 39/207 (19%) | ||
| WD40 repeat | 167..207 | CDD:293791 | |||
| WD40 repeat | 209..285 | CDD:293791 | |||
| WD40 repeat | 254..294 | CDD:293791 | |||
| WD40 repeat | 303..338 | CDD:293791 | |||
| WD40 repeat | 353..407 | CDD:293791 | 7/40 (18%) | ||
| WD40 | 385..747 | CDD:225201 | 67/363 (18%) | ||
| WD40 | 436..748 | CDD:295369 | 60/313 (19%) | ||
| WD40 repeat | 505..540 | CDD:293791 | 8/34 (24%) | ||
| WD40 repeat | 546..586 | CDD:293791 | 9/39 (23%) | ||
| WD40 repeat | 591..631 | CDD:293791 | 7/40 (18%) | ||
| WD40 repeat | 637..672 | CDD:293791 | 3/35 (9%) | ||
| WD40 repeat | 679..717 | CDD:293791 | 9/37 (24%) | ||
| WD40 repeat | 723..749 | CDD:293791 | 6/25 (24%) | ||
| Poc1b | XP_002729827.2 | WD40 | 10..298 | CDD:238121 | 69/383 (18%) |
| WD40 | 14..>300 | CDD:225201 | 70/385 (18%) | ||
| WD40 repeat | 21..58 | CDD:293791 | 7/41 (17%) | ||
| WD40 repeat | 64..100 | CDD:293791 | 10/77 (13%) | ||
| WD40 repeat | 105..141 | CDD:293791 | 10/35 (29%) | ||
| WD40 repeat | 148..183 | CDD:293791 | 9/41 (22%) | ||
| WD40 repeat | 189..225 | CDD:293791 | 9/55 (16%) | ||
| WD40 repeat | 231..267 | CDD:293791 | 9/35 (26%) | ||
| WD40 repeat | 273..297 | CDD:293791 | 5/23 (22%) | ||
| Ribosomal_S10 | <331..365 | CDD:294222 | 9/38 (24%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166337016 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.930 | |||||