DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15358 and selp

DIOPT Version :9

Sequence 1:NP_001303306.2 Gene:CG15358 / 33366 FlyBaseID:FBgn0031373 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001230252.1 Gene:selp / 796481 ZFINID:ZDB-GENE-110107-2 Length:868 Species:Danio rerio


Alignment Length:118 Identity:27/118 - (22%)
Similarity:52/118 - (44%) Gaps:11/118 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 FYIEDETRRNWTSAGSACRQMGTQLATIRSAEELAALRAKLNKER-HYWLDITDLEKEGDFRISA 199
            ::...:::.:||:|...|:...|.:..|::..|:|.|...|...| :||:.|..:  :|.:....
Zfish    28 YHYNIDSKLDWTAARQWCQTHFTDMVAIQNQAEIAYLNEILPFHRAYYWIGIRKI--DGHWTWVG 90

  Fly   200 SGKR--PNFLKWRAGQPNNFSGNQHCVDLL-----DGLMY-DNKCESLSYFIC 244
            :.||  .....|...:|||....:.||::.     |...: |.:|......:|
Zfish    91 TKKRLTVEAANWATNEPNNQGTGEDCVEIYIKRNKDTAKWNDERCSKKKATVC 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15358NP_001303306.2 CLECT 141..245 CDD:153057 27/113 (24%)
selpNP_001230252.1 CLECT_selectins_like 26..144 CDD:153062 27/118 (23%)
EGF_CA <153..178 CDD:238011
CCP <200..364 CDD:332582
CCP <324..489 CDD:332582
CCP 521..737 CDD:332582
CCP 751..806 CDD:153056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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