DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15358 and Clec10a

DIOPT Version :10

Sequence 1:NP_608629.3 Gene:CG15358 / 33366 FlyBaseID:FBgn0031373 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_008766090.1 Gene:Clec10a / 64195 RGDID:621158 Length:307 Species:Rattus norvegicus


Alignment Length:247 Identity:52/247 - (21%)
Similarity:97/247 - (39%) Gaps:57/247 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LTALSPMLDHIARHEGEWTSSVLQANATEARLARIETLQTAMN-IRQKV------LQ--EGFPKD 97
            |..|...||:...:    |.:.|||.|     :|.::|||.:| ::.:|      ||  .|..:.
  Rat    68 LETLRTTLDNTTSN----TKAELQALA-----SRGDSLQTGINSLKVEVDDHGQELQAGRGLSQK 123

  Fly    98 IVARLDRLESQQAALLRILSKF-DR-------------KIVAPK-------------FELIGSRF 135
            :.:....:|.::..|...||:. ||             ::.:.|             .|..||.:
  Rat   124 VASLESTVEKKEQTLRTDLSEITDRVQQLGKDLKTLTCQLASLKNNGSAVACCPLHWMEHEGSCY 188

  Fly   136 FYIEDETRRNWTSAGSACRQMGTQLATIRSAEELAALRAKLNKERHYWLDITDLEKEGDFR-ISA 199
            ::  .::.:.|..|...|:...:.|..:.|..|...|:..:... ..|:.:||  :.|.:| :..
  Rat   189 WF--SQSGKPWPEADKYCQLENSNLVAVNSLAEQNFLQTHMGSV-VTWIGLTD--QNGPWRWVDG 248

  Fly   200 SGKRPNFLKWRAGQPNNF-----SGNQHCVDLL-DGLMYDNKCESLSYFICQ 245
            :.....|..|...||:|:     .|.:.|.... ||...|:.|:....::|:
  Rat   249 TDYEKGFTHWAPKQPDNWYGHGLGGGEDCAHFTSDGRWNDDVCQRPYRWVCE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15358NP_608629.3 CLECT 141..245 CDD:153057 23/110 (21%)
Clec10aXP_008766090.1 Lectin_N 5..166 CDD:461106 24/106 (23%)
CLECT_DC-SIGN_like 176..301 CDD:153060 27/130 (21%)

Return to query results.
Submit another query.