DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15358 and Clec4f

DIOPT Version :10

Sequence 1:NP_608629.3 Gene:CG15358 / 33366 FlyBaseID:FBgn0031373 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_446205.1 Gene:Clec4f / 114598 RGDID:621062 Length:550 Species:Rattus norvegicus


Alignment Length:204 Identity:49/204 - (24%)
Similarity:96/204 - (47%) Gaps:31/204 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 VLQANATEARLARIETLQTAMNIRQKVLQEGFPKDIVARLDRLESQQAALLRILSKFDR------ 121
            :||:|..:|: |.:::|:|.:..         .|.:.|::...:|...||.:.::...:      
  Rat   352 MLQSNLQKAK-AEVQSLKTGLEA---------TKTLAAKIQGQQSDLEALQKAVAAHTQGQKTQN 406

  Fly   122 ---KIVAPKFELIGSRFFYIEDETRRNWTSAGSACRQMGTQLATIRSAEELAALRAKLNKERHYW 183
               :::...::....:|:|...: :::|..|.:.|...|..||::.|.||.|.|....|...| |
  Rat   407 QVLQLIMQDWKYFNGKFYYFSRD-KKSWHEAENFCVSQGAHLASVTSQEEQAFLVQITNAVDH-W 469

  Fly   184 LDITDLEKEGDFRISASGKRPNFLK----WRAGQPNNF-SGN---QHCVDLLDGLMYDNKCESLS 240
            :.:||...||::| ...|...::::    ||.|||:|: .||   :.||. |..:..|..|.:..
  Rat   470 IGLTDQGTEGNWR-WVDGTPFDYVQSRRFWRKGQPDNWRHGNGEREDCVH-LQRMWNDMACGTAY 532

  Fly   241 YFICQSDDD 249
            .::|:...|
  Rat   533 NWVCKKSTD 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15358NP_608629.3 CLECT 141..245 CDD:153057 33/111 (30%)
Clec4fNP_446205.1 SMC_prok_B <100..390 CDD:274008 10/47 (21%)
CLECT_DC-SIGN_like 414..538 CDD:153060 36/127 (28%)

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