DRSC/TRiP Functional Genomics Resources

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Protein Alignment wry and notch2

DIOPT Version :9

Sequence 1:NP_995611.2 Gene:wry / 33361 FlyBaseID:FBgn0051665 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_001108566.2 Gene:notch2 / 58065 ZFINID:ZDB-GENE-000329-4 Length:2475 Species:Danio rerio


Alignment Length:513 Identity:148/513 - (28%)
Similarity:209/513 - (40%) Gaps:108/513 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   482 PPK--------SVDKSTASPSSTTSTSTSTTTT----------MATLLATARTRPSAANPTKTAS 528
            ||:        .||:....|::..:..|.:.|.          .:.|..:......||.|....|
Zfish   289 PPEWTGQFCTDDVDECRLQPNACQNGGTCSNTRNGYNCVCVNGWSGLDCSENIDDCAAEPCTAGS 353

  Fly   529 KPIARPRILSRLQEKINSLECEIPNVPQDSHLWRGNETHELLLPI---VTTEHCKPDEHCVPNVL 590
            ..|          :::.|..|..|  |..:         .||..|   ..:..||...||..|.:
Zfish   354 TCI----------DRVASFVCSCP--PGKT---------GLLCHIDDACISNPCKMGAHCDTNPV 397

  Fly   591 TWRGEAEIQS---GDILIVEINDAMLNPSHEPNNTSSAVHATQVYQVTRSGHEHCDVTEGVLLDI 652
            ..:......|   |.....:|::.::.|:...:..|                  |..|||     
Zfish   398 NGKFSCNCPSGYKGSTCAEDIDECVIGPNPCEHGGS------------------CKNTEG----- 439

  Fly   653 TPLVVDGRKLVTLYDKDLTEGVNLLIVVSELWGAQCVRLKVTTKTDNCGENADCSGKGVCYSNSG 717
                        .:..:...|..         |.:|.:     ..:.||.| .|.....|....|
Zfish   440 ------------SFTCNCAPGYT---------GPRCEQ-----DINECGSN-PCQNDATCLDQIG 477

  Fly   718 MEEYECQCCSGFAGPHCE-EIDACNPSPCTNNGICVDLSQGHEGNSYQCLCPYGYAGKNCQYESD 781
              :|.|.|..||.|.||| :|:.|..|||.|||.|:|     :.:.:.|.||.|:.|:.||.:.|
Zfish   478 --DYTCICMPGFDGTHCENDINECLSSPCLNNGRCLD-----QVSRFVCECPQGFTGETCQVDID 535

  Fly   782 PCNPAECMNGGSCVGNSTHFRCDCAPGFTGPLCQHSLNECESSPCVHGICVDQEDGFRCFCQPGF 846
            .|....|.||..|:.....:.|:||.|||||||..::|:||..||.||.|:|....|.|.|.||:
Zfish   536 ECASTPCHNGAKCLDRPNGYECECAEGFTGPLCMENINDCEPQPCHHGKCIDGIATFHCDCLPGY 600

  Fly   847 AGELCNFEYNECESNPCQNGGECIDHIGSYECRCTKGFSGNRCQIKVDFCANKPCPEGHRCIDHG 911
            .|.:|:.:..||:|:||||||.|:|.:..|:|.|..|.:|..|||..|.||:.||..| .|.|..
Zfish   601 MGPICSEQIRECQSDPCQNGGRCVDMVNRYQCNCQPGTAGENCQINYDDCASNPCQHG-TCEDGI 664

  Fly   912 NDFSCECPGGRNGPDCNQMPRTYFQQCNVNPCTHGGTCWSSGDSFYCACRPGYTGTMC 969
            |::.|.|..|..|..|    .....:|:.|||..||||....:.|.|.|..|..|.:|
Zfish   665 NEYKCVCEPGYTGERC----ADEINECSSNPCQSGGTCEDKVNGFKCKCPVGTYGPLC 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wryNP_995611.2 EGF_CA 737..777 CDD:238011 15/39 (38%)
EGF 783..812 CDD:278437 11/28 (39%)
EGF_CA 819..851 CDD:238011 15/31 (48%)
EGF_CA 856..890 CDD:238011 16/33 (48%)
EGF_CA 893..927 CDD:238011 13/33 (39%)
EGF_CA <941..970 CDD:238011 13/29 (45%)
notch2NP_001108566.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11644
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D7525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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