DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wry and dll4

DIOPT Version :9

Sequence 1:NP_995611.2 Gene:wry / 33361 FlyBaseID:FBgn0051665 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_001073304.1 Gene:dll4 / 563920 ZFINID:ZDB-GENE-041014-73 Length:683 Species:Danio rerio


Alignment Length:366 Identity:113/366 - (30%)
Similarity:168/366 - (45%) Gaps:59/366 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   698 DNCGE-NADCSGKGVCYSNSGME--------EY------------ECQCCSGFAGPHC-EEIDAC 740
            :.|.| |.:||..|.|....|.:        .|            :|.|..|:.|..| ::::.|
Zfish   217 EGCSEANGNCSKPGECVCREGWQGKFCTECKTYPACKHGTCHLPGQCNCKEGWGGLFCDQDLNFC 281

  Fly   741 -NPSPCTNNGICVDLSQGHEGNSYQCLCPYGYAGKNCQYESDPCNPAECMNGGSCVGNSTHFRCD 804
             :..||.|...|::..||    ||.|:|..||.|.||:.:...|:.:...|||.|..:...:.|.
Zfish   282 THHKPCVNGATCMNTGQG----SYTCICRPGYTGVNCELQVRECDSSPRKNGGLCTDHDKSYTCT 342

  Fly   805 CAPGFTGPLCQHSLNECESSPCVH-GICVDQEDG--FRCFCQPGFAGELCNFEYNECESNPCQNG 866
            |.|.|.|..|:|||..|..|||.| |.|.::::|  :.|.|..|:.|..|....::|.|..|.|.
Zfish   343 CLPDFEGTHCEHSLLTCADSPCFHKGRCHEKDNGRSYACECPLGYTGLNCERRMDKCTSMLCAND 407

  Fly   867 GECIDHIGSYECRCTKGFSGNRCQIKVDFCANKPCPEGHRCIDHGNDFSCECPGGRNGPDCNQMP 931
            |.|:...|...|.|..||:|.||:|.::.|||.||..|..|.|..|::.|.||.|..|.:|::  
Zfish   408 GLCLILGGKRICSCRAGFTGQRCEININDCANNPCANGGTCYDRINEYVCSCPPGYKGRNCDR-- 470

  Fly   932 RTYFQQCNVNPCTHGGTCWS-SGDSFYCACRPGYTGTMCEDEFVVETVVSSSEFIVDDANARNFN 995
                ..|...||.:||:|.. :|:...|.|..|:||.:|| .:.|...|:..|          ..
Zfish   471 ----PSCLSTPCLNGGSCVGITGNPPACFCPSGFTGPLCE-YYAVTAPVTRGE----------TQ 520

  Fly   996 DKTFGSSVVLKSPIELHNAYFAAGVLAAAIFIVAVVVTICH 1036
            |:...::|.|           |.|::|..:.:..||:.:.|
Zfish   521 DRFQWAAVSL-----------AVGLVALVVLLCMVVIALRH 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wryNP_995611.2 EGF_CA 737..777 CDD:238011 15/40 (38%)
EGF 783..812 CDD:278437 9/28 (32%)
EGF_CA 819..851 CDD:238011 12/34 (35%)
EGF_CA 856..890 CDD:238011 13/33 (39%)
EGF_CA 893..927 CDD:238011 14/33 (42%)
EGF_CA <941..970 CDD:238011 11/29 (38%)
dll4NP_001073304.1 MNNL 22..83 CDD:284966
DSL 148..210 CDD:279722
EGF_CA 277..315 CDD:238011 15/41 (37%)
EGF_CA 433..468 CDD:238011 14/34 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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