DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wry and NOTCH4

DIOPT Version :9

Sequence 1:NP_995611.2 Gene:wry / 33361 FlyBaseID:FBgn0051665 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_004548.3 Gene:NOTCH4 / 4855 HGNCID:7884 Length:2003 Species:Homo sapiens


Alignment Length:618 Identity:149/618 - (24%)
Similarity:214/618 - (34%) Gaps:204/618 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 CEIPNVPQDSHLWRGNETHELLLPI----------------------VTTEHC--KPDEHCVPNV 589
            |:.|:..|::.|.:...:.:.|||.                      .|.|.|  |.::.|.|:.
Human    62 CQFPDPCQNAQLCQNGGSCQALLPAPLGLPSSPSPLTPSFLCTCLPGFTGERCQAKLEDPCPPSF 126

  Fly   590 LTWRGEAEIQ------------------------------SGDILIV------------------ 606
            .:.||...||                              :|.:.:.                  
Human   127 CSKRGRCHIQASGRPQCSCMPGWTGEQCQLRDFCSANPCVNGGVCLATYPQIQCHCPPGFEGHAC 191

  Fly   607 --EINDAMLNPSHEPNNTSSAVHATQVYQVTRSGHEHCDVTEGVLLDITPLVVDGRK-------- 661
              ::|:...:|...|..||                  |..|.|....:.|:..:|.:        
Human   192 ERDVNECFQDPGPCPKGTS------------------CHNTLGSFQCLCPVGQEGPRCELRAGPC 238

  Fly   662 ----------LVTLYDKDLTEGVNLLIVVSELWGAQCVRLKVTTKTDN----------------- 699
                      ...:.:||.|  .:|.:......|..|     ....||                 
Human   239 PPRGCSNGGTCQLMPEKDST--FHLCLCPPGFIGPDC-----EVNPDNCVSHQCQNGGTCQDGLD 296

  Fly   700 --------------CGENAD---------CSGKGVCYSNSGMEEYECQCCSGFAGPHCEE-IDAC 740
                          |.|:.|         |...|.|.:::|  .:.|.|.||:.|..||| :|.|
Human   297 TYTCLCPETWTGWDCSEDVDECETQGPPHCRNGGTCQNSAG--SFHCVCVSGWGGTSCEENLDDC 359

  Fly   741 NPSPCTNNGICVD------------------------LSQGHEGN----------SYQCLCPYGY 771
            ..:.|.....|:|                        |||...|:          |..|||..||
Human   360 IAATCAPGSTCIDRVGSFSCLCPPGRTGLLCHLEDMCLSQPCHGDAQCSTNPLTGSTLCLCQPGY 424

  Fly   772 AGKNCQYESDPC-----NPAECMNGGSCVGNSTHFRCDCAPGFTGPLCQHSLNECESSPCVHG-I 830
            :|..|..:.|.|     .|:.|.:||||:.....|.|.|.||:||..|:...|||.|.||..| .
Human   425 SGPTCHQDLDECLMAQQGPSPCEHGGSCLNTPGSFNCLCPPGYTGSRCEADHNECLSQPCHPGST 489

  Fly   831 CVDQEDGFRCFCQPGFAGELCNFEYNECESNPCQNGGECIDHIGSYECRCTKGFSGNRCQIKVDF 895
            |:|....|.|.|.||..|:||..|.|||.|.||.|..:|.|.:..::|.|..||||.||:..:|.
Human   490 CLDLLATFHCLCPPGLEGQLCEVETNECASAPCLNHADCHDLLNGFQCICLPGFSGTRCEEDIDE 554

  Fly   896 CANKPCPEGHRCIDHGNDFSCECPGGRNGPDCNQMPRTYFQQCNVNPCTHGGTCWSSGDSFYCAC 960
            |.:.||..|.:|.|....|.|:|..|..||.|    :|...:|..:||..|.:|.....:|:|.|
Human   555 CRSSPCANGGQCQDQPGAFHCKCLPGFEGPRC----QTEVDECLSDPCPVGASCLDLPGAFFCLC 615

  Fly   961 RPGYTGTMCEDEFVVETVVSSSEFIVDDANARN 993
            ..|:||.:||.......:....:...|..:..|
Human   616 PSGFTGQLCEVPLCAPNLCQPKQICKDQKDKAN 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wryNP_995611.2 EGF_CA 737..777 CDD:238011 16/73 (22%)
EGF 783..812 CDD:278437 13/33 (39%)
EGF_CA 819..851 CDD:238011 15/32 (47%)
EGF_CA 856..890 CDD:238011 16/33 (48%)
EGF_CA 893..927 CDD:238011 13/33 (39%)
EGF_CA <941..970 CDD:238011 10/28 (36%)
NOTCH4NP_004548.3 EGF_CA 194..232 CDD:238011 10/55 (18%)
EGF_CA 314..353 CDD:238011 10/40 (25%)
EGF_CA 432..473 CDD:238011 15/40 (38%)
EGF_CA 475..511 CDD:238011 16/35 (46%)
EGF_CA 515..549 CDD:238011 16/33 (48%)
EGF_CA 551..587 CDD:238011 14/39 (36%)
EGF_CA 590..625 CDD:238011 11/34 (32%)
EGF_CA <699..726 CDD:238011
EGF_CA <736..765 CDD:238011
EGF_CA 769..803 CDD:238011
EGF_CA <899..928 CDD:238011
EGF_CA 931..965 CDD:238011
EGF_CA 970..1004 CDD:238011
Notch 1165..1203 CDD:321927
LNR 1 1170..1213
NL 1207..1245 CDD:197463
LNR 2 1214..1250
Notch 1249..1285 CDD:306554
LNR 3 1251..1294
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1347..1371
NODP 1380..>1420 CDD:311559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1485..1508
ANK 1586..1721 CDD:238125
ANK repeat 1586..1630 CDD:293786
ANK 1 1633..1665
ANK repeat 1634..1664 CDD:293786
ANK 1661..1787 CDD:238125
ANK repeat 1666..1698 CDD:293786
ANK 2 1666..1698
ANK 3 1700..1732
ANK repeat 1700..1731 CDD:293786
ANK 4 1733..1765
ANK repeat 1733..1764 CDD:293786
Ank_5 1753..>1851 CDD:330893
ANK 5 1766..1798
ANK repeat 1766..1797 CDD:293786
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1900..1927
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1968..2003
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D7525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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