DRSC/TRiP Functional Genomics Resources

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Protein Alignment wry and crb

DIOPT Version :10

Sequence 1:NP_995611.2 Gene:wry / 33361 FlyBaseID:FBgn0051665 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_001247284.1 Gene:crb / 42896 FlyBaseID:FBgn0259685 Length:2253 Species:Drosophila melanogaster


Alignment Length:843 Identity:196/843 - (23%)
Similarity:302/843 - (35%) Gaps:249/843 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   432 PTTTTAAGSTATTTAESTT---------TAATTTRLPATTTGKYQKELKRAKLLLKALT----PP 483
            |||||.......||...||         |..|||::|..||         ::.|:...|    ||
  Fly   533 PTTTTPTPEQEPTTTPRTTPNPNPAIPNTLTTTTKIPPITT---------SRTLVGTTTGSRRPP 588

  Fly   484 KSVDKSTASPSSTTS-----------TSTSTTTTMATLLATARTRPSAANPTKTASKPIARPRIL 537
            :...:|....|::.:           |....:...:.:.|:..|..:....|...:..:|     
  Fly   589 QQPLQSPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYNCQTSTGDGASALA----- 648

  Fly   538 SRLQEKINSLECEIPNVPQDSHLWRG----NETHELLLPIVTTEHCKPDEHCVPNVLTWRGEAEI 598
                  :..:.|   |......|..|    |.||.......:.:.|:..|:|.|          :
  Fly   649 ------LTPINC---NATNGKCLNGGTCSMNGTHCYCAVGYSGDRCEKAENCSP----------L 694

  Fly   599 QSGDILIVEINDAMLNPSHEPNNTSSAVHATQVYQVTRSGHEHCDVTEGVLLDITPLVVDGRKLV 663
            ...:.::...|..:.     |.|......|||..|   :|.|..|:..|.               
  Fly   695 NCQEPMVCVQNQCLC-----PENKVCNQCATQPCQ---NGGECVDLPNGD--------------- 736

  Fly   664 TLYDKDLTEGVNLLIVVSELW-GAQCVRLKVTTKTDNCGENADCSGKGVCYSNSGMEEYECQCCS 727
              |:...|.|          | |..|     ....|.|..:....|.|:|.:..|  .|:|.|..
  Fly   737 --YECKCTRG----------WTGRTC-----GNDVDECTLHPKICGNGICKNEKG--SYKCYCTP 782

  Fly   728 GFAGPHCE-EIDACNPSPCTNNGICVDLSQGHEGNSYQCLCPYGYAGKNCQYESDPCNPAECMNG 791
            ||.|.||: ::|.|...||.|...|     .::.|:|:|:|..||.|:||:.:.|.|....|.||
  Fly   783 GFTGVHCDSDVDECLSFPCLNGATC-----HNKINAYECVCQPGYEGENCEVDIDECGSNPCSNG 842

  Fly   792 GSCVGNSTHFRCDCAPGFTGPLCQHSLNECESSPCVH-GICVDQEDGFRCFCQ-PGFAGELCNFE 854
            .:|:....:|.|:|.||.||.:|...:::|...||:: |.|:||..||||.|. .|:.||.|...
  Fly   843 STCIDRINNFTCNCIPGMTGRICDIDIDDCVGDPCLNGGQCIDQLGGFRCDCSGTGYEGENCELN 907

  Fly   855 YNECESNPCQNGGECIDHIGSYECRCTKGFSGNRCQIKVDFCANKPCPEGHRCIDHGN------- 912
            .:||.||||.||.:|:|.:..|.|.|..|:.|..|:..::.|.:.||.....|::..|       
  Fly   908 IDECLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCLERSNITLYQMS 972

  Fly   913 -------------------DFSCECPGGRNGPDCNQMPRTYFQQCNVNPCTHGGTCWSSGDSFYC 958
                               .:.|.|..|..|.:|    .....:|:.|||:..|.|.....::.|
  Fly   973 RITDLPKVFSQPFSFENASGYECVCVPGIIGKNC----EININECDSNPCSKHGNCNDGIGTYTC 1033

  Fly   959 ACRPGYTGTMCE------------------DEFVVETVVSSSEFIVDDANA---RNFNDKTFGSS 1002
            .|.||:.||.||                  |:             :||.:.   .|:..|  ..|
  Fly  1034 ECEPGFEGTHCEINIDECDRYNPCQRGTCYDQ-------------IDDYDCDCDANYGGK--NCS 1083

  Fly  1003 VVLKSPIELHNAYFAAGVLAAAIFIVAVVVTICHCKVNQTYR-----KFSTRS---TSFIPI--- 1056
            |:||...:  |.....|  |...:::..|..:.:|.....::     |.:|.|   ||.|.:   
  Fly  1084 VLLKGCDQ--NPCLNGG--ACLPYLINEVTHLYNCTCENGFQGDKCEKTTTLSMVATSLISVTTE 1144

  Fly  1057 ------------------------LGFSRRP------KVQGKLNKH------------------- 1072
                                    .|....|      .:.|:||.|                   
  Fly  1145 REEGYDINLQFRTTLPNGVLAFGTTGEKNEPVSYILELINGRLNLHSSLLNKWEGVFIGSKLNDS 1209

  Fly  1073 -WLSGKGATATSSTNIVAPPGGPRAGGAAGPQQVTRHLPGQPQ-TQTTLGGQLQE-RPFLRHL 1132
             |  .|...|.:::::|......:|....|..:...:  .||. .:|.|||.:.. :.:||||
  Fly  1210 NW--HKVFVAINTSHLVLSANDEQAIFPVGSYETANN--SQPSFPRTYLGGTIPNLKSYLRHL 1268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wryNP_995611.2 EGF_CA 737..777 CDD:238011 14/39 (36%)
EGF 783..812 CDD:394967 11/28 (39%)
EGF_CA 819..851 CDD:238011 15/33 (45%)
EGF_CA 856..890 CDD:238011 15/33 (45%)
EGF_CA 893..927 CDD:238011 9/59 (15%)
EGF 938..966 CDD:394967 10/27 (37%)
crbNP_001247284.1 LamG 91..228 CDD:238058
EGF 269..299 CDD:394967
EGF_CA <311..341 CDD:238011
EGF_CA 386..423 CDD:238011
EGF_CA 425..460 CDD:238011
EGF 466..495 CDD:394967
EGF 605..633 CDD:394967 2/27 (7%)
EGF_CA 716..750 CDD:238011 13/63 (21%)
EGF_CA 753..789 CDD:238011 12/37 (32%)
EGF_CA 792..828 CDD:238011 14/40 (35%)
EGF_CA 830..865 CDD:238011 13/34 (38%)
EGF_CA 868..905 CDD:238011 15/36 (42%)
EGF_CA 907..943 CDD:238011 15/35 (43%)
EGF_CA 1009..1045 CDD:238011 12/35 (34%)
EGF_CA 1047..1082 CDD:238011 5/49 (10%)
Laminin_G_1 1155..1290 CDD:395008 22/118 (19%)
EGF 1316..1346 CDD:394967
Laminin_G_1 1388..1550 CDD:395008
EGF_CA <1593..1622 CDD:238011
Laminin_G_2 1692..1828 CDD:460494
EGF_CA 1901..1937 CDD:238011
EGF_CA 1939..1974 CDD:238011
EGF_CA 2057..2094 CDD:238011
EGF_CA 2096..2133 CDD:238011
EGF_CA 2137..2175 CDD:238011
Blue background indicates that the domain is not in the aligned region.

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