DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wry and cue

DIOPT Version :9

Sequence 1:NP_995611.2 Gene:wry / 33361 FlyBaseID:FBgn0051665 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_612113.2 Gene:cue / 38174 FlyBaseID:FBgn0011204 Length:644 Species:Drosophila melanogaster


Alignment Length:618 Identity:118/618 - (19%)
Similarity:179/618 - (28%) Gaps:251/618 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 IDFANTKFQTDADAPNPPASHPEFSTTKFYNSKEL--YNEMLLHN------KRKLMKAAKAEGSP 408
            |.|.::.:||.|.|.:   ...|.|...|..|:||  :|::...|      ||.|:.|       
  Fly    41 IQFMDSSWQTIATAAH---EFDELSALTFDESEELIYFNDLKHRNGSIFSLKRDLIAA------- 95

  Fly   409 IKSAEDTTRATSSNVTPEGKTFGPTTTTAAGSTATTTAESTTTAATTTRLPATTTGKYQKELKRA 473
             ....:.|.|.:.|.:..|..:.|.....                            :..:.::.
  Fly    96 -NHVAEQTIARTGNESVGGLAYDPLNMNL----------------------------FWSDTEQR 131

  Fly   474 KLLLKAL----TPPKSVDKST--ASPSS------------TTSTSTSTTTTMATLLATARTRPSA 520
            |:....:    ||...||.|.  ..|..            |.|..|..|.....|        ..
  Fly   132 KIFFAPIHGSATPQVLVDLSAEGGRPDGVAVDVCRRKLYWTNSNVTHPTVERINL--------DG 188

  Fly   521 ANPTKTASKPIARPR--ILSRLQE------------------KINSLECEIPNVPQDSH------ 559
            :|.|...|..|..||  ::.:|.:                  |::..:.::  |.:|.|      
  Fly   189 SNRTVIISSNIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESSKLDGSDRQV--VLKDKHHEPLNL 251

  Fly   560 -------LWRGNET-----HELLLPIVTTEHCKPDEHCVPNVLTWRGEAEIQSGDILIVEINDAM 612
                   .|....|     |..:..|..|...||||....:...:: :.|..:.|..:|.:    
  Fly   252 AVTNDAIYWTDRTTRAVWSHPKVPVIKVTTTSKPDEEDSTDSTDFK-DPEPVAEDCPLVRV---- 311

  Fly   613 LNPSHEPNNTSSAVHATQVYQVTRSGHEHCDVTEGVLLDITPLVVDGRKLVTLYDKDLTEGVNLL 677
            .|.|.|   ....|..|..||..:..| ||                               .:::
  Fly   312 ANLSEE---ARGIVARTGFYQRLQKDH-HC-------------------------------ASIV 341

  Fly   678 IVVSELWGAQCVRLKVTTKTDNCGENADCSGKGVCYSNSGMEEYECQCCSGFAGPHCEEIDACNP 742
            ..|.|....|..:.::.:..|                                    ::|.....
  Fly   342 RKVKERVDEQSRKFEIRSLLD------------------------------------QKIKVLED 370

  Fly   743 SPCTNNG---ICVDLSQGHEGNSYQCLCPYGYAGKNCQYESDPCNPAECMNGGSCVGNSTHFRCD 804
            ..|.|:|   ...||          |:||.|:.|..|:                           
  Fly   371 ERCMNDGEYRAATDL----------CICPTGFKGSRCE--------------------------- 398

  Fly   805 CAPGFTGPLCQHSLNECESSPCVHGICVDQEDGF-RCFCQPGFAGELCNFEYNECESNPCQNGGE 868
                         :.||.:. ||||.|...|..: :|:|||||.||.|  |.:.| |..|.|||.
  Fly   399 -------------IRECHNY-CVHGTCQMSELAYPKCYCQPGFKGERC--ELSVC-SGLCLNGGH 446

  Fly   869 C---IDHIGSYECRCTKGFSGNRC-QIKVDFCA 897
            |   .|...:..|.|...|.|.|| |...:.|:
  Fly   447 CRVSKDENEAPSCECPAKFGGARCEQNSTEICS 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wryNP_995611.2 EGF_CA 737..777 CDD:238011 11/42 (26%)
EGF 783..812 CDD:278437 0/28 (0%)
EGF_CA 819..851 CDD:238011 16/32 (50%)
EGF_CA 856..890 CDD:238011 14/37 (38%)
EGF_CA 893..927 CDD:238011 1/5 (20%)
EGF_CA <941..970 CDD:238011
cueNP_612113.2 LY 101..141 CDD:214531 6/67 (9%)
Ldl_recept_b 167..208 CDD:278487 11/48 (23%)
LY 193..237 CDD:214531 6/43 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24044
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.