DRSC/TRiP Functional Genomics Resources

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Protein Alignment wry and Sned1

DIOPT Version :9

Sequence 1:NP_995611.2 Gene:wry / 33361 FlyBaseID:FBgn0051665 Length:1157 Species:Drosophila melanogaster
Sequence 2:XP_038939693.1 Gene:Sned1 / 316638 RGDID:1566079 Length:1504 Species:Rattus norvegicus


Alignment Length:623 Identity:143/623 - (22%)
Similarity:196/623 - (31%) Gaps:257/623 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   583 EHCVPNVLTWRGEAEIQSGDILIVEIND-AMLNPSHE---------PNNTSSAVHATQVYQVTRS 637
            :.||.... |......::||:...|..| ||||.:.|         |:.:::.|.....|:||..
  Rat    97 DRCVVAAF-WADVDNRRAGDVYYREATDAAMLNRATEDIRRYFPELPDFSATWVFVATWYRVTFF 160

  Fly   638 GHEHCDVTEGVLLDITPLVVDGRKLVTLYDKDLTEGVNLLIVVSELW------------------ 684
            |...   :..|....|.|:.|||...|:::.:           |.||                  
  Rat   161 GGSS---SSPVNTFQTVLITDGRFSFTIFNYE-----------SILWTTGTHASSGGDADGLGGI 211

  Fly   685 ---------------------GAQCVRLKVTT-----------------KTDNCGENAD------ 705
                                 .|....::.||                 :...||....      
  Rat   212 AAQAGFNAGDGHRYFNIPGSRTADMAEVETTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLVLR 276

  Fly   706 -CSGKGVCYSN--SGMEEYECQCCSGFAGPHCE-EIDACNPSPCTNNGICVDLSQGHEGNSYQCL 766
             |...|.|..:  :|...|.|.|.:||.|..|. :::.|...||.|.|.|.     |..||:.|.
  Rat   277 PCLNGGKCIDDCVTGNPSYTCSCLAGFTGRRCHLDVNECASHPCQNGGTCT-----HGVNSFSCQ 336

  Fly   767 CPYGYAGKNCQYESDPCNPAECMNGGSCVGNSTHFRCDCAPGFTGPLCQHSLNECESSPCVH--- 828
            ||.|:.|..|:....||:...|.|||.|...|:...|.|..|:||..|:..::||.|.||::   
  Rat   337 CPAGFQGPTCESAQSPCDNKVCQNGGQCQAESSSAVCVCQAGYTGATCETDVDECSSDPCLNGGS 401

  Fly   829 ----------------------------------------GICVDQEDGF--------------- 838
                                                    |.|||.:.|:               
  Rat   402 CVDLVGNYSCICVEPFEGPQCETGSYVVPSPCLSNPCLNGGTCVDADQGYVCECPEGFMGLDCRE 466

  Fly   839 ------------RCF--------CQPGFAGELCNFEY---------------------------- 855
                        ||.        |.|||.|.||.||.                            
  Rat   467 RILNDCDCRNGGRCLGANTTICQCPPGFFGLLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVC 531

  Fly   856 -----------NECESNPCQNGGECIDHIGSYECRCTKGFSGNRCQI------------------ 891
                       :.|:|:||.|||.|..|..||.|.|.:||.|..|:.                  
  Rat   532 HTDHNISHSLPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRHCEKARPHLCSSGPCRNGGTCK 596

  Fly   892 ----------------------KVDFCANKPCPEGHRCIDHGNDFSCECPGGRNGPDCNQMPRTY 934
                                  |.|.||:.||..|..|..:...:.|:||.|.:|..|...|...
  Rat   597 ETGDEYRCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSPC 661

  Fly   935 FQQCNVNPCTHGGTCWSSGDSFYCACRPGYTGTMCEDE 972
            |:    :||.:||.|...|..|.|.|:|||||..|:.|
  Rat   662 FR----SPCMNGGICEDLGTDFSCHCQPGYTGHRCQAE 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wryNP_995611.2 EGF_CA 737..777 CDD:238011 14/39 (36%)
EGF 783..812 CDD:278437 11/28 (39%)
EGF_CA 819..851 CDD:238011 17/109 (16%)
EGF_CA 856..890 CDD:238011 16/33 (48%)
EGF_CA 893..927 CDD:238011 12/33 (36%)
EGF_CA <941..970 CDD:238011 14/28 (50%)
Sned1XP_038939693.1 NIDO 104..260 CDD:214712 29/170 (17%)
EGF_CA 272..308 CDD:238011 10/35 (29%)
EGF_CA 311..347 CDD:238011 14/40 (35%)
EGF_CA 387..423 CDD:238011 5/35 (14%)
EGF_CA 433..464 CDD:238011 5/30 (17%)
EGF_CA 545..577 CDD:238011 16/31 (52%)
EGF_CA 585..616 CDD:238011 0/30 (0%)
EGF_CA 621..655 CDD:238011 12/33 (36%)
EGF_CA <664..693 CDD:238011 14/28 (50%)
CCP 698..752 CDD:153056
EGF_CA 754..789 CDD:238011
EGF_CA 793..827 CDD:238011
EGF_CA 931..966 CDD:238011
fn3 1009..1089 CDD:394996
fn3 1108..1189 CDD:394996
FN3 1205..1297 CDD:238020
EGF_CA 1412..1443 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D7525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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