DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wry and sned1

DIOPT Version :9

Sequence 1:NP_995611.2 Gene:wry / 33361 FlyBaseID:FBgn0051665 Length:1157 Species:Drosophila melanogaster
Sequence 2:XP_017212114.1 Gene:sned1 / 100001751 ZFINID:ZDB-GENE-100913-1 Length:1374 Species:Danio rerio


Alignment Length:524 Identity:133/524 - (25%)
Similarity:203/524 - (38%) Gaps:140/524 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   702 ENADCSGKGVCYSNSGMEEYECQCCSGFAGPHCEEI--DACNPSPCTNNGICVDLSQGHEGNSYQ 764
            :::.|...|.||...|  :|.|:|..|:.|.|||.:  ..|..|||.|.|.|.:     |.:||.
Zfish   553 DSSPCQNGGYCYERDG--DYICECKHGYRGKHCERVRLSICASSPCRNGGSCKE-----EADSYH 610

  Fly   765 CLCPYGYAGKNCQY-ESDPCNPAECMNGGSCVGNSTHFRCDCAPGFTG----------------- 811
            |:|||.:.||:|:. :.|||..:.|.|||:|......::|:|:|.|.|                 
Zfish   611 CVCPYRFTGKHCEVGKPDPCASSPCRNGGTCFHYIGKYKCECSPSFMGRHCEINRGSNPALEGLD 675

  Fly   812 ---------------------------------------------------PLCQHSLNECESSP 825
                                                               |:|: .:|||.|.|
Zfish   676 CGPPVKAKHAEVQYSSTTPGSMALYLCHPGYTPLTRATQIICSSQGSWSQPPVCE-EINECLSQP 739

  Fly   826 CVH-GICVDQEDGFRCFCQPGFAGELCNFEYNECESNPCQNGGECIDHIGSYECRCTKGFSGNRC 889
            |:: |.|.|:...:.|.|:.||.|:.|..:.:||.|.||::|..|.|..|||.|.|.:|::|..|
Zfish   740 CMNGGTCRDRVASYLCECEEGFTGQRCQTDMDECLSEPCKHGSTCEDQPGSYFCHCQEGYAGQDC 804

  Fly   890 QIKVDFCANKPCPEGHRCIDHGNDFSCECPGGRNGPDCNQMPRTYFQQCNVNPCTHGGTCWSSGD 954
            :::.|.|...||..|..|..:..:..|.|..|..|..|    :|....|.:.||.:.|.|.|...
Zfish   805 EMEQDGCEPNPCLNGGICRGYRRNHLCVCKEGYIGDRC----QTLENPCVLQPCGNRGVCRSDRR 865

  Fly   955 SFY-CACRPGYTGTMCEDEFVVETVVSSSEFIVDDANAR----NFNDKTFGSSVVLKSPI----- 1009
            ..| ||||.|:||..||.:.:..:.::......::...|    :..........|..:|:     
Zfish   866 GNYSCACRVGHTGRDCERDLLPPSGLNVLRVEENEVELRWDQSDVTQNLISGFAVAFAPVGRVPR 930

  Fly  1010 ------ELHNAYFAAGVLAAAIFIVAVVVTICHCKVNQTYRKFSTRSTSFI----PILGFSR-RP 1063
                  :.|:.|...|:....::                  ..||.|.:.|    |.....| ||
Zfish   931 KTDFLEKKHSTYVLQGLNPGQLY------------------NISTYSVNSIDKSQPAFALIRTRP 977

  Fly  1064 KVQGKL-------NKHWLS-----GKGATATSSTNIVAPPGGPRAGGAAGPQQVTRH-----LPG 1111
            :...:|       ::.||.     |:.|..:.....:.|..|..:..|.....||.:     |||
Zfish   978 RQVDQLEVVNVSSSQVWLRWLVHVGRHAAISQVRVSLVPADGSGSRTAVLNSSVTDYTFSTLLPG 1042

  Fly  1112 QPQT 1115
            |..|
Zfish  1043 QMYT 1046

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wryNP_995611.2 EGF_CA 737..777 CDD:238011 16/41 (39%)
EGF 783..812 CDD:278437 11/96 (11%)
EGF_CA 819..851 CDD:238011 14/32 (44%)
EGF_CA 856..890 CDD:238011 15/33 (45%)
EGF_CA 893..927 CDD:238011 10/33 (30%)
EGF_CA <941..970 CDD:238011 13/29 (45%)
sned1XP_017212114.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D7525at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.