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Protein Alignment c-cup and Pgrmc2
DIOPT Version :9
Sequence 1: | NP_608623.2 |
Gene: | c-cup / 33360 |
FlyBaseID: | FBgn0031367 |
Length: | 201 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_081834.1 |
Gene: | Pgrmc2 / 70804 |
MGIID: | 1918054 |
Length: | 217 |
Species: | Mus musculus |
Alignment Length: | 146 |
Identity: | 35/146 - (23%) |
Similarity: | 61/146 - (41%) |
Gaps: | 28/146 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 72 ESQPKDT----KGHDIVLLTLEELTAFDGS-SPSLPIYTALNGLIYDLSPGREKFSSHGPYSLLA 131
|..|..| |..| .:||:|..:||: :|. |..|:||.::|::.|.:.:...|||.:.|
Mouse 82 EESPAATLPRMKKRD---FSLEQLRQYDGARTPR--ILLAVNGKVFDVTKGSKFYGPAGPYGIFA 141
Fly 132 GCNANKVLNIAC-------------SSMGVCAANVISRWEQSLRAEFKVVGYLVDADIDIISGSP 183
|.:|::.|...| |.:.......:..||...:.::..||.|:.. ...|
Mouse 142 GRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKP-----GEEP 201
Fly 184 VKHTNSAIGEQMEKSD 199
.::|:....:...|.|
Mouse 202 SEYTDEEDTKDHSKQD 217
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1110 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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