DRSC/TRiP Functional Genomics Resources

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Protein Alignment c-cup and cyb5d2

DIOPT Version :10

Sequence 1:NP_608623.2 Gene:c-cup / 33360 FlyBaseID:FBgn0031367 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001016154.1 Gene:cyb5d2 / 548908 XenbaseID:XB-GENE-981419 Length:273 Species:Xenopus tropicalis


Alignment Length:122 Identity:32/122 - (26%)
Similarity:55/122 - (45%) Gaps:21/122 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LLTLEELTAFDGSSPSLPIYTALNGLIYDLSPGREKFSSHGPYSLLAGCNANK------------ 137
            |::.|||:.:||...|..||.|:.|.::|:..|.:.:...|.||..||.:|::            
 Frog    46 LMSKEELSVYDGGPGSSGIYLAILGQVFDVHKGSKHYGPGGSYSFFAGKDASRAYMTGDFTEKGL 110

  Fly   138 ---VLNIACSSMGVCAANVISRWEQSLRAEFKVVGYLVDADIDIISGSPVKHTNSAI 191
               |..::...| :...|.:|.::|:.....|:.|...|.     ||:|.|....|:
 Frog   111 VDDVTELSPLQM-LHLHNWLSFYQQNYITIGKLTGRFYDE-----SGNPTKALEDAL 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c-cupNP_608623.2 COG4892 87..172 CDD:443920 25/99 (25%)
cyb5d2NP_001016154.1 Cyt-b5 48..110 CDD:459698 18/61 (30%)

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