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Protein Alignment c-cup and cyb5d2
DIOPT Version :9
Sequence 1: | NP_608623.2 |
Gene: | c-cup / 33360 |
FlyBaseID: | FBgn0031367 |
Length: | 201 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001016154.1 |
Gene: | cyb5d2 / 548908 |
XenbaseID: | XB-GENE-981419 |
Length: | 273 |
Species: | Xenopus tropicalis |
Alignment Length: | 122 |
Identity: | 32/122 - (26%) |
Similarity: | 55/122 - (45%) |
Gaps: | 21/122 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 LLTLEELTAFDGSSPSLPIYTALNGLIYDLSPGREKFSSHGPYSLLAGCNANK------------ 137
|::.|||:.:||...|..||.|:.|.::|:..|.:.:...|.||..||.:|::
Frog 46 LMSKEELSVYDGGPGSSGIYLAILGQVFDVHKGSKHYGPGGSYSFFAGKDASRAYMTGDFTEKGL 110
Fly 138 ---VLNIACSSMGVCAANVISRWEQSLRAEFKVVGYLVDADIDIISGSPVKHTNSAI 191
|..::...| :...|.:|.::|:.....|:.|...|. ||:|.|....|:
Frog 111 VDDVTELSPLQM-LHLHNWLSFYQQNYITIGKLTGRFYDE-----SGNPTKALEDAL 161
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
c-cup | NP_608623.2 |
Cyt-b5 |
87..>115 |
CDD:295147 |
11/27 (41%) |
cyb5d2 | NP_001016154.1 |
Cyt-b5 |
48..>109 |
CDD:365921 |
18/60 (30%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1355837at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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