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Protein Alignment c-cup and Pgrmc1
DIOPT Version :9
Sequence 1: | NP_608623.2 |
Gene: | c-cup / 33360 |
FlyBaseID: | FBgn0031367 |
Length: | 201 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_058063.2 |
Gene: | Pgrmc1 / 53328 |
MGIID: | 1858305 |
Length: | 195 |
Species: | Mus musculus |
Alignment Length: | 184 |
Identity: | 42/184 - (22%) |
Similarity: | 73/184 - (39%) |
Gaps: | 45/184 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 PAKL-GPNLMTASKVLKSPLGQALVSFLVGYFVTTKLSQFYGKFKRD-----SEKSDESTQYLDM 67
|::| |..|: .::..|||...|:...: |:..|: .:.| .:..|:....|..
Mouse 13 PSELEGGGLL--HEIFTSPLNLLLLGLCI--FLLYKI------VRGDQPGASGDNDDDEPPPLPR 67
Fly 68 YPRKESQPKDTKGHDIVLLTLEELTAFDG-SSPSLPIYTALNGLIYDLSPGREKFSSHGPYSLLA 131
..|::..| .||..||| ..|. |..|:||.::|::.||:.:...|||.:.|
Mouse 68 LKRRDFTP-------------AELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFA 117
Fly 132 GCNANKVLNIAC-------------SSMGVCAANVISRWEQSLRAEFKVVGYLV 172
|.:|::.|...| |.:.......:|.|:.....::..||.|:
Mouse 118 GRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLL 171
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1110 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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