Protein Alignment c-cup and pgrmc2

DIOPT Version :10

• Sequence 1: NP_608623.2
• Gene: c-cup / 33360
• FlyBaseID: FBgn0031367
• Length: 201
• Species: Drosophila melanogaster
• Sequence 2: NP_998269.1
• Gene: pgrmc2 / 406378
• ZFINID: ZDB-GENE-040426-2102
• Length: 201
• Species: Danio rerio
• Alignment Length: 164
• Identity: 36/164 - (21%)
• Similarity: 67/164 - (40%)
• Gaps: 34/164 - (20%)

  Fly    27 LGQALVSFLVGYFVTTKLSQFYGKFKR----DSEKSDESTQYLDMYPRKESQPKDTKGHDIVLLT 87
            ||..|::..|...|.......|.::.|    |..:..|::      |..:.:.:|        .|
Zfish    32 LGGMLLNLSVLVLVLAACYVLYARWWRRAGADLGRGSEAS------PLPKMRRRD--------FT 82

  Fly    88 LEELTAFDG-SSPSLPIYTALNGLIYDLSPGREKFSSHGPYSLLAGCNANKVLNIAC-------- 143
            |::|..:|| .:|.  |..|:|..::|::.|::.:...|||.:.||.:|::.|...|
Zfish    83 LQQLRDYDGVQNPR--ILMAVNTKVFDVTSGKKFYGREGPYGIFAGRDASRGLATFCLEKDALRD 145

  Fly   144 -----SSMGVCAANVISRWEQSLRAEFKVVGYLV 172
                 |.:.......:..||.....::..||.|:
Zfish   146 EYDDLSDLNAVQMESVREWEMQFMEKYDYVGRLL 179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
c-cup	NP_608623.2	COG4892	87..172	CDD:443920	24/98 (24%)
pgrmc2	NP_998269.1	Cyt-b5	82..145	CDD:459698	19/64 (30%)