DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment c-cup and CG16957

DIOPT Version :9

Sequence 1:NP_608623.2 Gene:c-cup / 33360 FlyBaseID:FBgn0031367 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001285897.1 Gene:CG16957 / 34755 FlyBaseID:FBgn0032519 Length:192 Species:Drosophila melanogaster


Alignment Length:186 Identity:39/186 - (20%)
Similarity:76/186 - (40%) Gaps:44/186 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KSPLGQALVSFLVGYFVTTKLSQFYGKFKRDS-EKSDESTQYLDMYPRKESQPKDTKGHDIVLLT 87
            ::|:...|:  ::...|..||..|..:..|:. :.||::.|.:|:.|.:    ||        .|
  Fly    24 ETPIDVTLL--IMSIVVFLKLGFFARRLSREEPDFSDDNNQEVDLPPLR----KD--------FT 74

  Fly    88 LEELTAFDGSSPSLPIYTALNGLIYDLSPGREKFSSHGPYSLLAGCNANKVL------------- 139
            :.||..:||:.....|..|:...|||:|.....:..:|.....||.:.:::|             
  Fly    75 VRELREYDGTRADGRILVAILFNIYDVSRSVHYYGRNGVNPNYAGRDISRILINSPEDLKDSEDF 139

  Fly   140 ----NIACSSMGVCAANVISRWEQSLRAEFKVVGYL-------VDADIDIISGSPV 184
                :::.:.|     |.:..|||..:.::..||.|       .:.|.::....|:
  Fly   140 DDLSDLSRNQM-----NTLREWEQRYKMKYPFVGKLKEKLQINEEEDFELQQADPL 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c-cupNP_608623.2 Cyt-b5 87..>115 CDD:295147 10/27 (37%)
CG16957NP_001285897.1 Cyt-b5 72..170 CDD:278597 23/110 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1110
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10281
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.