Protein Alignment c-cup and MSBP

DIOPT Version :10

• Sequence 1: NP_608623.2
• Gene: c-cup / 33360
• FlyBaseID: FBgn0031367
• Length: 201
• Species: Drosophila melanogaster
• Sequence 2: NP_573087.1
• Gene: MSBP / 32548
• FlyBaseID: FBgn0030703
• Length: 248
• Species: Drosophila melanogaster
• Alignment Length: 167
• Identity: 41/167 - (24%)
• Similarity: 78/167 - (46%)
• Gaps: 35/167 - (20%)

  Fly    21 KVLKSPLGQALVSFLVGYFVTTKLSQFYGKFKRDSEKSDESTQYLDMYPRKESQPKDTK-GHDIV 84
            ::|.||:..||::.:.  |:..|:.:             :.|:...:...|.|:|:..| ..|
  Fly    35 EILYSPMNLALLAIIC--FLVYKIVR-------------DRTEVPSVGVAKPSEPELPKIRRD-- 82

  Fly    85 LLTLEELTAFDGSSPSLPIYTALNGLIYDLSPGREKFSSHGPYSLLAGCNANKVLNIA------- 142
             .|::||..:||:.|...:..|:||.:||:|.||..:...|||:..||.:|::  |:|
  Fly    83 -FTVKELRQYDGTQPDGRVLVAVNGSVYDVSKGRRFYGPGGPYATFAGRDASR--NLATFSVVSI 144

  Fly   143 -------CSSMGVCAANVISRWEQSLRAEFKVVGYLV 172
                   .|.:.....:.:..||...:.::::||.|:
  Fly   145 DKDEYDDLSDLSAVEMDSVREWEMQFKEKYELVGKLL 181

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
c-cup	NP_608623.2	COG4892	87..172	CDD:443920	27/98 (28%)
MSBP	NP_573087.1	Cyt-b5	84..152	CDD:459698	22/69 (32%)