DRSC/TRiP Functional Genomics Resources

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Protein Alignment c-cup and CG12056

DIOPT Version :10

Sequence 1:NP_608623.2 Gene:c-cup / 33360 FlyBaseID:FBgn0031367 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_572535.1 Gene:CG12056 / 31855 FlyBaseID:FBgn0030099 Length:287 Species:Drosophila melanogaster


Alignment Length:108 Identity:31/108 - (28%)
Similarity:52/108 - (48%) Gaps:11/108 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LVSFLVGYFVTTKLSQFYGKFKRDSEKSDESTQYLDMYPRKESQPKDTK-GHDI-VLLTLEELTA 93
            :|:.::|....|::.||..:         ::..|||...:..|.|...: |.|| .|.|..||..
  Fly    16 VVAAVLGGIYHTEIRQFLRR---------QTDNYLDQAGQDASIPLAFQAGDDIGTLFTPAELAK 71

  Fly    94 FDGSSPSLPIYTALNGLIYDLSPGREKFSSHGPYSLLAGCNAN 136
            |:|.....|:|.||.|.::|:|.|.:.:.|...|:...|.:|:
  Fly    72 FNGEEEGRPLYLALLGSVFDVSRGIKHYGSGCSYNFFVGRDAS 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c-cupNP_608623.2 COG4892 87..172 CDD:443920 17/50 (34%)
CG12056NP_572535.1 Cyt-b5 65..>122 CDD:459698 17/50 (34%)

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