DRSC/TRiP Functional Genomics Resources

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Protein Alignment c-cup and Nenf

DIOPT Version :9

Sequence 1:NP_608623.2 Gene:c-cup / 33360 FlyBaseID:FBgn0031367 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001002851.1 Gene:Nenf / 289380 RGDID:1303289 Length:171 Species:Rattus norvegicus


Alignment Length:122 Identity:32/122 - (26%)
Similarity:62/122 - (50%) Gaps:24/122 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 KGHDIVLLTLEELTAFDGSSPSLPIYTALNGLIYDLSPGREKFSSHGPYSLLAGCNANKVLNIAC 143
            :|..:.|.|.|||..:.|.....|||.|:.|:::|::.|:|.:....||:.|||.::::  .:|.
  Rat    39 RGPPVRLFTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSR--GVAK 101

  Fly   144 SSM----------GVCAANVISR---WEQSLRAEFKVVGY----LVDADIDIISGSP 183
            .|:          |:.|..:.:.   :.:..:|::.:|||    :::.|     |||
  Rat   102 MSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVGYTARRILNED-----GSP 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c-cupNP_608623.2 Cyt-b5 87..>115 CDD:295147 11/27 (41%)
NenfNP_001002851.1 Cyt-b5 45..>100 CDD:278597 19/56 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..171 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1110
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10281
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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