DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17712 and gfod1

DIOPT Version :9

Sequence 1:NP_608619.1 Gene:CG17712 / 33356 FlyBaseID:FBgn0027597 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_009295943.1 Gene:gfod1 / 556899 ZFINID:ZDB-GENE-091118-89 Length:391 Species:Danio rerio


Alignment Length:398 Identity:181/398 - (45%)
Similarity:256/398 - (64%) Gaps:26/398 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPGVGVFGTGEIANVLVPLLREKGFEVRAIWGRTLKEAKETATTQNVQFHTNVIDDVLLRKDVD 65
            ||||||||||...|.|::|||:.:||.|:|:||||.:||:|.|...||.|:||.||||||..|||
Zfish     1 MLPGVGVFGTSLTARVIIPLLKGEGFSVKALWGRTQEEAEELARDMNVPFYTNRIDDVLLHPDVD 65

  Fly    66 LVFIVCQPFLHAEISVKALGIGKHVVCDKPAGLHQQDALKMVRASQYYPTLISLVNHPLRFLPAF 130
            ||.|...|.|..:|:||.|||||:|:||:.|  ...||.:|:.|:||||.|:|::.:.|||||||
Zfish    66 LVCINLPPPLTRQIAVKTLGIGKNVICDRTA--TPLDAFRMMSAAQYYPKLLSIMGNVLRFLPAF 128

  Fly   131 THMRRCLQEELIGSIGDVVLMDVRVQMGTLFPEKYNWMCDAQMGGGALNLVGS-VVDLVTFLLQQ 194
            ..|:..|:|   |.||::::.:.:|..|:|..:||||.||..||||.|:.||| ::||:|||..:
Zfish   129 VRMKELLEE---GYIGELMVCEAQVHSGSLLGKKYNWSCDDLMGGGGLHSVGSYIIDLLTFLTGR 190

  Fly   195 QAIRVHGVLRSYTKTTPAINGIRQITAPDFCNFQMELASGTLVTVALHSHTVPAKAFSQEVLIYG 259
            :|.:|||.|:::.|.|..|.||||||:.|||.|||.|..|...||.| :..||.: |.|||::.|
Zfish   191 RAAKVHGFLKTFVKQTDHIRGIRQITSDDFCTFQMVLEGGACCTVTL-NFNVPGE-FRQEVVVVG 253

  Fly   260 SKGHLVVRGGDLFVLK-EGQPKEEAVYVDVQDLHFATNNSL-------LPRPYIKGLCKMVGALK 316
            :.|.|.|.|.||:..| :|:..:|.:   ::|.....|.||       :|.||:.|...||.|::
Zfish   254 TAGRLKVCGTDLYGQKNDGECGQELL---LKDKTAIGNASLPDKAFRDIPSPYLTGTICMVQAVR 315

  Fly   317 EAFGSKES--SWVKAPVSTAATFEDGLYVQAVVEAIRKSNETRQWQRVQLSTDSP-----LNHDQ 374
            :||..::.  :|...|::.||||||.||...||:.|:|||:..:||.:::.|:.|     ....:
Zfish   316 QAFQDQDDRRTWDGRPLTMAATFEDCLYALCVVDTIKKSNQCGEWQNIEVMTEEPEVSPAYLISE 380

  Fly   375 IIRYARMS 382
            .:|.:|||
Zfish   381 AMRRSRMS 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17712NP_608619.1 MviM 5..364 CDD:223745 171/369 (46%)
gfod1XP_009295943.1 MviM 5..>260 CDD:223745 133/261 (51%)
GFO_IDH_MocA 5..117 CDD:279716 63/113 (56%)
GFO_IDH_MocA_C 132..>195 CDD:304482 28/65 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590289
Domainoid 1 1.000 189 1.000 Domainoid score I3226
eggNOG 1 0.900 - - E1_COG0673
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H49581
Inparanoid 1 1.050 314 1.000 Inparanoid score I2550
OMA 1 1.010 - - QHG48581
OrthoDB 1 1.010 - - D356632at33208
OrthoFinder 1 1.000 - - FOG0001912
OrthoInspector 1 1.000 - - otm24384
orthoMCL 1 0.900 - - OOG6_104973
Panther 1 1.100 - - O PTHR43818
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1924
SonicParanoid 1 1.000 - - X2601
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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