DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17712 and gfod1

DIOPT Version :9

Sequence 1:NP_608619.1 Gene:CG17712 / 33356 FlyBaseID:FBgn0027597 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_012819881.1 Gene:gfod1 / 394777 XenbaseID:XB-GENE-947602 Length:404 Species:Xenopus tropicalis


Alignment Length:412 Identity:181/412 - (43%)
Similarity:261/412 - (63%) Gaps:41/412 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPGVGVFGTGEIANVLVPLLREKGFEVRAIWGRTLKEAKETATTQNVQFHTNVIDDVLLRKDVD 65
            ||||||||||...:.|::|||:::||.|:|:||||.:||:|.|...:|.|:||.||||||.:|||
 Frog     1 MLPGVGVFGTSLTSRVIIPLLKDEGFSVKALWGRTQEEAEELAKEMSVPFYTNRIDDVLLHQDVD 65

  Fly    66 LVFIVCQPFLHAEISVKAL--------------GIGKHVVCDKPAGLHQQDALKMVRASQYYPTL 116
            ||.|...|.|..:|:||.|              ||||:|:||:.|  ...||.:|:.|:.|||.|
 Frog    66 LVCINLPPPLTKQIAVKTLEGQETEDRNENGSTGIGKNVICDRTA--TPLDAFRMMSAAHYYPKL 128

  Fly   117 ISLVNHPLRFLPAFTHMRRCLQEELIGSIGDVVLMDVRVQMGTLFPEKYNWMCDAQMGGGALNLV 181
            :|::.:.|||||||..|::.:||   |.:|::.:.:|:|..|:|..:||||.||..||||.|:.|
 Frog   129 MSIMGNVLRFLPAFVKMKQLIQE---GYVGELQVCEVQVHSGSLLGKKYNWSCDDLMGGGGLHSV 190

  Fly   182 GS-VVDLVTFLLQQQAIRVHGVLRSYTKTTPAINGIRQITAPDFCNFQMELASGTLVTVALHSHT 245
            || ::||:|||..|:|::|||:|:::.|.|..|.||||||:.|||.|||.|..|...||.| :..
 Frog   191 GSYIIDLLTFLTSQKAVKVHGLLKTFVKQTDHIKGIRQITSDDFCTFQMVLEGGVCCTVTL-NFN 254

  Fly   246 VPAKAFSQEVLIYGSKGHLVVRGGDLFVLKEGQPKEEAVYVDVQDLHFATNNSLLPR-------- 302
            ||.: |.|:|::.||.|.|:|.|.||:..:......|.:..|...:    :|||||.        
 Frog   255 VPGE-FKQDVIVVGSAGRLIVTGIDLYGQRNSSSDRELLLKDSTPV----SNSLLPEKAFSDIPS 314

  Fly   303 PYIKGLCKMVGALKEAFGSKES--SWVKAPVSTAATFEDGLYVQAVVEAIRKSNETRQWQRVQLS 365
            ||::|..|||.|:::||..::.  :|...|::.||||:|.||...||:.|:|||:|.:||.:.:.
 Frog   315 PYLRGTIKMVQAVRQAFQDQDDRRTWDGRPLTMAATFDDCLYALCVVDTIKKSNQTGEWQNIVIM 379

  Fly   366 TDSP-LNHDQII----RYARMS 382
            |:.| |:...:|    |.:|||
 Frog   380 TEEPELSPAYLISEAMRRSRMS 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17712NP_608619.1 MviM 5..364 CDD:223745 169/383 (44%)
gfod1XP_012819881.1 MviM 5..376 CDD:223745 169/381 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 205 1.000 Domainoid score I2857
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H49581
Inparanoid 1 1.050 325 1.000 Inparanoid score I2448
OMA 1 1.010 - - QHG48581
OrthoDB 1 1.010 - - D356632at33208
OrthoFinder 1 1.000 - - FOG0001912
OrthoInspector 1 1.000 - - otm49191
Panther 1 1.100 - - O PTHR43818
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1924
SonicParanoid 1 1.000 - - X2601
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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