DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17646 and ABCG40

DIOPT Version :9

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_173005.1 Gene:ABCG40 / 838122 AraportID:AT1G15520 Length:1423 Species:Arabidopsis thaliana


Alignment Length:716 Identity:181/716 - (25%)
Similarity:300/716 - (41%) Gaps:166/716 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SSELSIDETSSTSSRGSCELTSKVTNDLNGFQSPNYHQAVAHANFDHCDPVDIQFADVRYTVKKF 118
            :.|.:.|||...|:| |..:.....|...|...|             .:|..|.|.:|.|:|   
plant   787 AEEPASDETELQSAR-SEGVVEAGANKKRGMVLP-------------FEPHSITFDNVVYSV--- 834

  Fly   119 SFPERKFV--TKE----ILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSGFCSTG-VSGDIRVN 176
            ..|:....  |:|    :|.|:||:||.|.|||:||.|||||:||::|::|..:.| :.|:|.::
plant   835 DMPQEMIEQGTQEDRLVLLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGNITIS 899

  Fly   177 RKPMAPSSERFRQMLCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMDLIKHILSLLGLD 241
            ..|  .:.:.|.::..|..|.|:..|.:.|.|.::.:|.|:|..:|.|..:...|:.::.|:.|.
plant   900 GYP--KNQQTFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPKEVDKNKRKIFIEEVMELVELT 962

  Fly   242 HRYNVPTG-----KLSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVALLKKLASQGH 301
            .......|     .||..|:|||.||:||::||.::::||||:|||:.:.:..:..::.....|.
plant   963 PLRQALVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR 1027

  Fly   302 TIVCTIHQPSALIFEMFDKLYTVV-DGHCMYQGPV----RELVPFLADQQLV--CPSYHNPADYL 359
            |:||||||||..|||.||:|:.:. .|..:|.||:    ..|:.:....|.:  ....:|||.::
plant  1028 TVVCTIHQPSIDIFEAFDELFLLKRGGEEIYVGPLGHESTHLINYFESIQGINKITEGYNPATWM 1092

  Fly   360 LEVAVGEHQRDLNELIHAANKKYYEDVDRHRYMSSDDMARLVESIKENMGGKAVVKTSEALAAFA 424
            |||:....:..|..                      |.|:             |.|.||.     
plant  1093 LEVSTTSQEAALGV----------------------DFAQ-------------VYKNSEL----- 1117

  Fly   425 AAQFSSFDYVKPSPQELALEEIKALSGGPESADPDLLEKNLRPQPQPLAKAGELARPPNAIRSAS 489
                    |.:..      |.||.||                 ||.|.:|  :|..|..  .|.|
plant  1118 --------YKRNK------ELIKELS-----------------QPAPGSK--DLYFPTQ--YSQS 1147

  Fly   490 FLMQYVLLMQRILICAKRNYFLLLARIFSHIFIGVVFGYLYMNVGNNAQ------SVLGNYVYLY 548
            ||.|.:..:.:......||......|....|.|.::||.::.::|...:      :.:|:   :|
plant  1148 FLTQCMASLWKQHWSYWRNPPYTAVRFLFTIGIALMFGTMFWDLGGKTKTRQDLSNAMGS---MY 1209

  Fly   549 GSTLLLVYTGKMAVVLTFPLEIDMLTREHFNRWYKLGPYFLSLISFEIPFQSLCTAMYIIISVHL 613
            .:.|.|......:|.....:|..:..||.....|...||..:.:..|||:..:...:|.:|...:
plant  1210 TAVLFLGLQNAASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAM 1274

  Fly   614 TGNDATD-SFRIYYFMLLGI-------------------MASLSAQA----WGFFVGATLPT--- 651
            .|.:.|. .|..|.|.:.|.                   :||:.:.|    |..|.|..:|.   
plant  1275 IGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSM 1339

  Fly   652 ----KLAVFLGPILAVMFSVFGFCTRYIDIT-PLF-------RWMWHLSYFRAGFHG---ALNAI 701
                :...:|.|:...::.:  ..:::.||| |:.       :::.....:|.||.|   |:|.|
plant  1340 PVWWEWYYWLCPVAWTLYGL--IASQFGDITEPMADSNMSVKQFIREFYGYREGFLGVVAAMNVI 1402

  Fly   702 Y 702
            :
plant  1403 F 1403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 87/242 (36%)
3a01204 123..765 CDD:273361 164/647 (25%)
ABC2_membrane 497..698 CDD:279410 47/248 (19%)
ABCG40NP_173005.1 PLN03140 10..1423 CDD:215599 181/716 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.