DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17646 and ABCG8

DIOPT Version :9

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_200098.1 Gene:ABCG8 / 835363 AraportID:AT5G52860 Length:589 Species:Arabidopsis thaliana


Alignment Length:609 Identity:150/609 - (24%)
Similarity:254/609 - (41%) Gaps:127/609 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 ADVRYTVKKFSFPERKFVTKE----ILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSGFCSTGV 169
            :.:.||:.|.|....:|...|    ||..:..:....|:.|::|||||||||||::::...|. .
plant    19 SSISYTIPKTSLSLLRFPATEPPSFILRNITLTAHPTEILAVVGPSGAGKSTLLDILASKTSP-T 82

  Fly   170 SGDIRVNRKPMAPSSERFRQMLCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMDLIKHI 234
            ||.|.:|..|:.|||  :|::..|:.|.|...|.|.|.|....||.|.|   ...:...:.:..:
plant    83 SGSILLNSIPINPSS--YRKISSYVPQHDSFFPLLTVSETFSFAACLLL---PNPSIVSETVTSL 142

  Fly   235 LSLLGLDHRYNVPTGK-LSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVALLKKLA- 297
            ||.|.|.|..:....: ||||:::|::|.|.|:.:|..|.|||||:||||.|....:.:||.:| 
plant   143 LSELNLTHLSHTRLAQGLSGGERRRVSIGLSLLHDPCFLLLDEPTSGLDSKSAFDVIHILKSIAV 207

  Fly   298 SQGHTIVCTIHQPSALIFEMFDKLYTVVDGHCMYQGPVRELVPFLADQQLVCPSYHNPADYLLEV 362
            |:..|::.:|||||..|..:.|:|..:..|..:|.|.:..|..||..:....|...|..:|.:|:
plant   208 SRQRTVILSIHQPSFKILSIIDRLLLLSKGTVVYHGRLDSLEGFLLFKGFTVPPQLNSLEYAMEI 272

  Fly   363 AVGEHQRDLNELIHAANKKYYEDVDRHRYMSSDDMARLVESIKENMGGKAVVKTSEALAAFAAAQ 427
                                                                             
plant   273 ----------------------------------------------------------------- 272

  Fly   428 FSSFDYVKPSPQELALEEIKALSGGPESADPDLLEKNLRPQPQPLAKAGELARPPNAIRSASFLM 492
                           |:|::...|..::.....:|...:.:.|.:.:..:           |.:.
plant   273 ---------------LQELRESDGNTDATALPSIENRKQREKQSIVRYRK-----------SRIT 311

  Fly   493 QYVLLMQRILICAKRNYFLLLARIFSHIFIGVVFGYLYMNVGNNAQSVLGNY-VYLYGSTLLLVY 556
            :..||.:|......|...|||......:.:|:|.|.:|:|:|.....:...: ::.:..|.||..
plant   312 EISLLARRFWKIIYRTRQLLLTNALEALVVGLVLGTIYINIGIGKAGIEKRFGMFAFTLTFLLSS 376

  Fly   557 TGKMAVVLTFPLEID---MLTREHFNRWYKLGPYFLSLISFEIPFQSLCTAMYIIISVHLTGNDA 618
            |.:     |.|:.|:   :|.||..:..|:|..:.|:.....:|:..:.:.:|.:....|.|...
plant   377 TTE-----TLPIFINERPILLRETSSGIYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCP 436

  Fly   619 T-DSFRIYYFMLLGIMASLSAQAWGFFVGATLP-----TKLAVFLGPILAVMFSVFGFCTRYIDI 677
            | .:|.  ||:|:..:..|.|.::..|:.:..|     |.|...|   ||..|...|:   :|..
plant   437 TWQAFG--YFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTIL---LAAFFLFSGY---FISK 493

  Fly   678 TPLFRWMWHLSYFRAGFHGALNAI 701
            ..|.:: |...||.:.:..||:|:
plant   494 ESLPKY-WLFMYFFSMYKYALDAL 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 82/229 (36%)
3a01204 123..765 CDD:273361 146/595 (25%)
ABC2_membrane 497..698 CDD:279410 50/210 (24%)
ABCG8NP_200098.1 P-loop_NTPase 29..243 CDD:304359 79/219 (36%)
3a01204 44..584 CDD:273361 144/584 (25%)
ABC2_membrane 316..519 CDD:279410 53/215 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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