DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17646 and abcg2

DIOPT Version :10

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:XP_012819987.2 Gene:abcg2 / 734088 XenbaseID:XB-GENE-991895 Length:682 Species:Xenopus tropicalis


Alignment Length:604 Identity:163/604 - (26%)
Similarity:289/604 - (47%) Gaps:74/604 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IQFADVRYTVKKFS--FPERKFVTKEILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSGFCS-T 167
            :.|.::.|.||..|  ...||...:.||:.:||..|.| |.||:||:|:|||:||:|::.... .
 Frog    56 LSFYNINYKVKVKSGLICCRKVTERVILNDVNGIMRPG-LNAILGPTGSGKSSLLDVLAARKDPN 119

  Fly   168 GVSGDIRVNRKPMAPSSERFRQMLCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMDLIK 232
            |:||.:.|:.:|. ||:  |:.:..|:.|||::...|.:.|.:..:|.|:|...|.:..|.:.|.
 Frog   120 GLSGQVLVDGEPQ-PSN--FKCLSGYVVQDDVVMGTLSIRENLQFSAALRLPRSVKQKEKDERIN 181

  Fly   233 HILSLLGLDHRYNVPTGK-----LSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVAL 292
            .::..|||....:...|.     :|||::||..|.:|||::|.:|:|||||||||:|:.::.:.|
 Frog   182 QVIKELGLTKVADSKVGTQFIRGVSGGERKRTNIGMELITDPGILFLDEPTTGLDASTANAVLLL 246

  Fly   293 LKKLASQGHTIVCTIHQPSALIFEMFDKLYTVVDGHCMYQGPVRELVPFLADQQLVCPSYHNPAD 357
            ||:::.||.||:.:||||...||.:||.|..:..|..::.||.|:.:.:.......|.|::||||
 Frog   247 LKRMSRQGKTIIFSIHQPRYSIFRLFDSLTLLAGGRLLFHGPSRDALDYFTGLGYECESHNNPAD 311

  Fly   358 YLLEVAVGEHQR-DLNELIHAANKKYYEDVDRHRYMSSDDMARLVESIKENMGGKAVVKTSEALA 421
            :.|::..|:... .||:|         |||         ::....:.:.:| |.|.||:.     
 Frog   312 FFLDIINGDSTAVALNKL---------EDV---------ELENEQKEVNDN-GSKTVVEN----- 352

  Fly   422 AFAAAQFSSFDYVKPSPQELALEEIKALSGGPESADPDLLEKNLRPQPQPLAKAGELARPPNAIR 486
              .:.||.:..|...:..||     :.:|.|.:                  .|:...||  ....
 Frog   353 --LSEQFCTTSYYLETKAEL-----EKMSLGKK------------------IKSNFFAR--QITY 390

  Fly   487 SASFLMQYVLLMQRILICAKRNYFLLLARIFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYLYGST 551
            :.|||.|...:.:|......||....:|::...:.:.::.|.::..|..:...:......|:..|
 Frog   391 NTSFLHQLKWVCKRSFKNLWRNPQASIAQVMVTLVLALIVGAIFFGVKEDVSGIQNRVGSLFFVT 455

  Fly   552 LLLVYTGKMAVVLTFPLEIDMLTREHFNRWYKLGPYFLS-LISFEIPFQSLCTAMYIIISVHLTG 615
            ....::...|:.| |.:|..:...|:.:.:|:|..||.: |.:..:|.::|.:.::..:...:.|
 Frog   456 TNQCFSSVSAIEL-FIVEKKIFIHEYISGYYRLSAYFFAKLFTDLLPMRTLPSIIFTSVIYFMIG 519

  Fly   616 NDAT-DSFRIYYFMLLGIMASLSAQAWGFFVGATLPTKLAVFLGPILAVMFSVFG--FCTRYIDI 677
            ..|| .:|....|.|:.|..:.::.|.....|..:     |.:..:|..:..||.  |....:::
 Frog   520 FKATAGAFFTMMFTLMMIAYTAASMALAVAAGQDV-----VAVANLLMTICFVFMIIFSGLLVNL 579

  Fly   678 TPLFRWMWHLSYFRAGFHG 696
            |.:..|:..|.||....:|
 Frog   580 TSVMDWISWLKYFSIPRYG 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 3a01204 123..765 CDD:273361 158/585 (27%)
abcg2XP_012819987.2 3a01204 73..675 CDD:273361 158/587 (27%)

Return to query results.
Submit another query.