DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17646 and abcg2c

DIOPT Version :9

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:XP_005156580.1 Gene:abcg2c / 569858 ZFINID:ZDB-GENE-050517-37 Length:640 Species:Danio rerio


Alignment Length:688 Identity:178/688 - (25%)
Similarity:309/688 - (44%) Gaps:142/688 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ELSIDETSSTSSRGS--CELTSKVTNDLNGFQSPNYHQAVAHANFDHCDPVDIQFADVRYTVKK- 117
            |:.::|.|||.:..|  |            ||:|.              |. :.|..:||.:|: 
Zfish    10 EVVVNEQSSTDADESVPC------------FQTPG--------------PT-VTFHQIRYRIKER 47

  Fly   118 ---FSFPERKFVTKEILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSG-------------FCS 166
               ||...|:   |:||..::|....| :.|||||:|:||::||:|::|             ..:
Zfish    48 LGMFSCQWRE---KDILKDVSGIMNPG-MNAIMGPTGSGKTSLLDVIAGRKDPKGLKSGQVLVDN 108

  Fly   167 TGVSGDIRVNRKPMAPSSERFRQMLC--YIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMD 229
            |.|:.|:|                ||  |:.|:|:|...|.|.|.:..:|:|:|..|...:...:
Zfish   109 TIVTSDLR----------------LCSAYVVQNDILMGTLTVRENLAFSANLRLSLKEYSSSDKE 157

  Fly   230 L-IKHILSLLGLDHRYNVPTGKL-----SGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSS 288
            : :..::..|||....:...|.:     |||:|||.:|.:|||::|.:|:|||||||||:::.:|
Zfish   158 MRVNSVIQELGLKDCADTKIGTMFLRGVSGGEKKRCSIGMELITSPSLLFLDEPTTGLDANTANS 222

  Fly   289 CVALLKKLASQGHTIVCTIHQPSALIFEMFDKLYTVVDGHCMYQGPVRELVPFLADQQLVCPSYH 353
            .:.||:.::.:|.|::.:||||...||..||.|..:..|..:|.|...:.:.:..|....|..::
Zfish   223 IMELLQNISKKGKTVIFSIHQPRYSIFRQFDHLTLMNKGEIIYAGAADKAIIYFEDLGYKCEPFN 287

  Fly   354 NPADYLLEVAVGEHQRDLNELIHAANKKYYEDVDRHRYMSSDDMARLVESIKENMGGKAVVKTSE 418
            ||||:.|:|..|                   .:..|:  ||::::....|.:|      :|....
Zfish   288 NPADFFLDVTNG-------------------TIRPHK--SSNNISEKCSSSEE------MVDNEN 325

  Fly   419 ALAAFAAAQFSSFDYVKPSPQELALEE-IKALSGGPESADPDLLEKNLRPQPQPLAKAGELARPP 482
            .||..          .:.||....|:: :..:|.|   .||::.:.:         |.| .|.| 
Zfish   326 PLAVM----------YRKSPYFTKLKDRLTEISDG---LDPEVTKGD---------KIG-YATP- 366

  Fly   483 NAIRSASFLMQYVLLMQRILICAKRNYFLLLARIFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYL 547
                   |..|.:|:..|.:....||.....|::|.:||.|::.|.:|..:.:.....|.|....
Zfish   367 -------FYYQLLLVSGRTIRNILRNPQTSYAQLFLNIFFGILVGLIYYQIPHTLPEALQNRTGA 424

  Fly   548 YGSTLLLVYTGKMAVVLTFPLEIDMLTREHFNRWYKLGPYFLSLISFE-IPFQSLCTAMYIIISV 611
            :...::.:..|.::.|..|..|.::...|:.:.:|:...||||.:..: ||.:.|...::..|..
Zfish   425 FFFLVINMVFGNLSAVELFVSERELFIHENSSGFYRTSAYFLSKVFADLIPNRILPVFIFSAIPY 489

  Fly   612 HLTG-NDATDSFRIYYFMLLGIMASLSAQAWGFFVGATLPT-KLAVFLGPILAVMFSVF-GFCTR 673
            .:.| ....::|.:|...:  .|.||||.:..|.|.|::.: .:|..|..:..|...|| ||...
Zfish   490 FMMGLKPEVEAFFLYCVTM--SMVSLSAVSLAFLVSASVGSFAMANILIALPYVFMMVFGGFLVN 552

  Fly   674 YIDITPLFRWMWHLSYFRAGFHG-ALNAIYGMDRPFLE 710
            ...:.....|:...|.||.|::. |:|.:  .|:.|.:
Zfish   553 LNSMLSGLSWLKWASIFRYGYNALAINEL--KDQVFTD 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 83/254 (33%)
3a01204 123..765 CDD:273361 161/615 (26%)
ABC2_membrane 497..698 CDD:279410 49/205 (24%)
abcg2cXP_005156580.1 ABCG_EPDR 34..267 CDD:213180 82/253 (32%)
3a01204 37..638 CDD:273361 167/634 (26%)
ABC2_membrane 377..579 CDD:279410 50/203 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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