DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17646 and abcg1

DIOPT Version :9

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_001103924.1 Gene:abcg1 / 556979 ZFINID:ZDB-GENE-070424-84 Length:673 Species:Danio rerio


Alignment Length:744 Identity:266/744 - (35%)
Similarity:394/744 - (52%) Gaps:122/744 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DPDSGCLGINCCTTAASSELSIDETSSTSSRGSCELTSKVTNDLNGFQSPNYHQAVAHANFDHCD 102
            ||.:.|:.|:   ...|:.:|..:|....:.     ..||.|:|...|..:|        .....
Zfish    32 DPRTVCVSID---EMMSNHVSSQQTPLLHAH-----LKKVENNLTEAQRFSY--------LPRRP 80

  Fly   103 PVDIQFADVRYTVKKFSFPE----RKFVTKEILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSG 163
            .|:|:|.|:.|:|     ||    ||...|.:|.|::|:|..|.|.|||||||||||||:|:::|
Zfish    81 AVNIEFKDLSYSV-----PEGPWWRKKGYKTLLKGISGNFTGGALVAIMGPSGAGKSTLMNILAG 140

  Fly   164 FCSTGVSGDIRVNRKPMAPSSERFRQMLCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKM 228
            :..||:.|:|.:|..|....|  ||::.|||.|||:|.|.|.|.|.|:::|:|||..|  ...:.
Zfish   141 YRETGMKGEILINGHPRDLRS--FRKVSCYIMQDDMLLPHLTVQEAMMVSANLKLQEK--DEGRR 201

  Fly   229 DLIKHILSLLGLDHRYNVPTGKLSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVALL 293
            ::::.||:.|||.......|..|||||:|||||||||::||||::.||||:|||||||...|:|:
Zfish   202 EMVREILTALGLLECAKTRTSHLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSSSCFQVVSLM 266

  Fly   294 KKLASQGHTIVCTIHQPSALIFEMFDKLYTVVDGHCMYQGPVRELVPFLADQQLVCPSYHNPADY 358
            |.||..|.|::||||||||.:||:|||||.:..|.|:|:|.|..|:|:|.|..|.||:||||||:
Zfish   267 KALAQGGRTVICTIHQPSAKVFELFDKLYVLSQGQCIYRGKVSSLIPYLRDLGLSCPTYHNPADF 331

  Fly   359 LLEVAVGEHQRDLNELIHAANKKYYEDVDRHRYMSSDDMARLVESIKEN---------MGGKAVV 414
            ::|||.||:                          .|..||||::::|:         |.|..| 
Zfish   332 IMEVASGEY--------------------------GDQTARLVKAVQEHKCEKDYKTEMNGNGV- 369

  Fly   415 KTSEALAAFAAAQFSSFDYVKPSPQELALEEIKALSGGPESADPDLLEKNLRPQPQPLAKAGELA 479
                         .:.|.:.:||.:|.:..|      |..|.                       
Zfish   370 -------------HNPFLWHRPSDEESSSSE------GCHSF----------------------- 392

  Fly   480 RPPNAIRSASFLMQYVLLMQRILICAKRNYFLLLARIFSHIFIGVVFGYLYMNVGNNAQSVLGNY 544
                   |||.|.|:.:|.:|..:...|:..|...||.||:.||::.|.||:.:||.|:.||.|.
Zfish   393 -------SASCLTQFCILFKRTFLSIMRDSVLTHLRIMSHLGIGILIGLLYLGIGNEAKKVLSNS 450

  Fly   545 VYLYGSTLLLVYTGKMAVVLTFPLEIDMLTREHFNRWYKLGPYFLSLISFEIPFQSLCTAMYIII 609
            .:|:.|.|.|::...|..|||||||:.:..|||.|.||.|..|:|:....::|||.:....|..|
Zfish   451 GFLFFSMLFLMFAALMPTVLTFPLEMGVFLREHLNYWYSLKAYYLAKTMADVPFQIVFPVAYCSI 515

  Fly   610 SVHLTGNDATDSFRIYYFMLLGIMASLSAQAWGFFVG-ATLPTKLAVFLGPILAVMFSVF-GFCT 672
            ...:| :..:|:.|...|:.||.:.||.||:.|..:| |:...::|.|:||:.|:...:| ||..
Zfish   516 VYWMT-SQPSDAVRFILFLALGTLTSLVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFV 579

  Fly   673 RYIDITPLFRWMWHLSYFRAGFHGALNAIYGMDRPFLEC--PETAMYCHFRSPKVFLKYMMISDV 735
            .:..|....:|:.::||.|.||.|.:.:|||:||..|.|  .||   |||:..:..||.:.:.|.
Zfish   580 SFDTIPKYLQWISYISYVRYGFEGVILSIYGLDREDLHCDKDET---CHFQKSEAILKELDVEDA 641

  Fly   736 HMSDCLILMGIVIGVMHVLTLITLWHKLN 764
            .:....|::||....:.::....|.:|::
Zfish   642 KLYMDFIVLGIFFISLRLIAYFVLRYKIS 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 118/233 (51%)
3a01204 123..765 CDD:273361 245/655 (37%)
ABC2_membrane 497..698 CDD:279410 74/202 (37%)
abcg1NP_001103924.1 3a01204 67..673 CDD:273361 256/701 (37%)
ABCG_EPDR 81..306 CDD:213180 118/233 (51%)
ABC2_membrane 403..605 CDD:279410 74/202 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.880

Return to query results.
Submit another query.