DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17646 and Abcg2

DIOPT Version :9

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_852046.1 Gene:Abcg2 / 312382 RGDID:631345 Length:657 Species:Rattus norvegicus


Alignment Length:697 Identity:192/697 - (27%)
Similarity:315/697 - (45%) Gaps:126/697 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IQFADVRYTVK-KFSFPERKFVTKEILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSGFCS-TG 168
            :.|..:.|.|| |..|..||...||||..:||..:.| |.||:||:|.|||:||:|::.... .|
  Rat    37 LSFHHITYRVKVKSGFLVRKTAEKEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPRG 100

  Fly   169 VSGDIRVNRKPMAPSSERFRQMLCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMDLIKH 233
            :|||:.:|.   ||....|:....|:.|||::...|.|.|.:..:|.|:|...:....|.:.|..
  Rat   101 LSGDVLING---APQPANFKCSSGYVVQDDVVMGTLTVRENLQFSAALRLPKAMKTHEKNERINT 162

  Fly   234 ILSLLGLDHRYNVPTGK-----LSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVALL 293
            |:..||||...:...|.     :|||::||.:|.:|||::|.:|:|||||||||||:.::.:.||
  Rat   163 IIKELGLDKVADSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLL 227

  Fly   294 KKLASQGHTIVCTIHQPSALIFEMFDKLYTVVDGHCMYQGPVRELVPFLADQQLVCPSYHNPADY 358
            |:::.||.||:.:||||...||::||.|..:..|..|:.||.::.:.:.|.....|..|:||||:
  Rat   228 KRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGKLMFHGPAQKALEYFASAGYHCEPYNNPADF 292

  Fly   359 LLEVAVGEHQR---DLNELIHAANKKYYEDVDRHRYMSSDDMARLVESIKENMGGKAVVKTSEAL 420
            .|:|..|:...   :..|..|.|||             :::.::..:.|.||:            
  Rat   293 FLDVINGDSSAVMLNRGEQDHEANK-------------TEEPSKREKPIIENL------------ 332

  Fly   421 AAFAAAQFSSFDYVKPSPQELALEEIKALSGGPESADPDLLEKNLRPQPQPLAKAGELA-RPPNA 484
                 |:|                .|.:...|...|:.|.|       |....|.|..| |.|..
  Rat   333 -----AEF----------------YINSTIYGETKAELDQL-------PVAQKKKGSSAFREPVY 369

  Fly   485 IRSASFLMQYVLLMQRILICAKRNYFLLL-------ARIFSHIFIGVVFGYLYMNVGNN---AQS 539
            :.|....::::         |:|::..||       |::...:.:|::.|.||..:.|:   .|:
  Rat   370 VTSFCHQLRWI---------ARRSFKNLLGNPQASVAQLIVTVILGLIIGALYFGLKNDPTGMQN 425

  Fly   540 VLGNYVYLYGSTLLLVYTGKMAVVLTFPLEIDMLTREHFNRWYKLGPYFL-SLISFEIPFQSLCT 603
            ..|.:.:|   |....:|...||.| |.:|..:...|:.:.:|::..||. .|:|..:|.:.|.:
  Rat   426 RAGVFFFL---TTNQCFTSVSAVEL-FVVEKKLFIHEYISGYYRVSSYFFGKLVSDLLPMRFLPS 486

  Fly   604 AMYIIISVHLTGNDAT-DSFRIYYFMLLGIMASLSAQAWGFFVGATLPTKLAVFLGPILAVMFSV 667
            .:|..:...:.|...| ::|.|..|.|:.:..:.|:.|.....|.:: ..:|..|..|..|...:
  Rat   487 VIYTCLLYFMLGLKRTVEAFFIMMFTLIMVAYTASSMALAIAAGQSV-VSVATLLMTISFVFMML 550

  Fly   668 F-GFCTRYIDITPLFRWMWHLSYFRAGF----HGALNAIYGMD-RPFLE------CPETAMYCHF 720
            | |.......|.|...|:.:.|..|.||    |   |...|.: .|.|.      |..:...|..
  Rat   551 FSGLLVNLRTIGPWLSWLQYFSIPRYGFTALQH---NEFLGQEFCPGLNVTMNSTCVNSYTICTG 612

  Fly   721 RSPKVFLKYMMISDVHMSD-----------CLILMGIVIGVMHVLTL 756
            ..      |::...:.:|.           |:|::.:.|..:.:|.|
  Rat   613 ND------YLINQGIDLSPWGLWRNHVALACMIIIFLTIAYLKLLFL 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 93/233 (40%)
3a01204 123..765 CDD:273361 186/679 (27%)
ABC2_membrane 497..698 CDD:279410 52/217 (24%)
Abcg2NP_852046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
3a01204 46..651 CDD:273361 188/684 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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