DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17646 and Abcg3l3

DIOPT Version :9

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_001100675.1 Gene:Abcg3l3 / 305142 RGDID:1564709 Length:647 Species:Rattus norvegicus


Alignment Length:701 Identity:177/701 - (25%)
Similarity:310/701 - (44%) Gaps:146/701 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IQFADVRY--TVKKFSFPERKFV-TKEILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSGF--- 164
            :.|.::.|  ||:. .||.|:.. ..|.|..::|....| |.|||||....:|.||:|::..   
  Rat    37 LSFHNISYRETVQS-GFPLRQQTHVMERLSSISGIMGPG-LNAIMGPQDGSRSLLLDVLAARRDP 99

  Fly   165 CSTGVSGDIRVNRKPMAPSSERFRQMLCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMD 229
            |  |:||||.||.||. |::  |:....|:.|:|::...:.|.:.:..:|.|:|...:|:..|..
  Rat   100 C--GLSGDILVNGKPQ-PAN--FKCTSGYVPQNDVIMHTVTVRDNLEFSAALRLPMTITRNEKRR 159

  Fly   230 LIKHILSLLGLDHRYNVPTGKLSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVALLK 294
            .|..:|.||.|:...|  |...|...:||.:||:||::..|:|:||:||||||..:.:..:|:|:
  Rat   160 RINEVLELLHLEKEQN--TKPRSKELRKRTSIAVELVTEHPILFLDDPTTGLDLRTTTDIIAVLR 222

  Fly   295 KLASQGHTIVCTIHQPSALIFEMFDKLYTVVDGHCMYQGPVRELVPFLADQQLVCPSYHNPADYL 359
            :::.:|.|::.:|:||...||..||.|..|..|..|:.||.::.:.:.........|::||||:.
  Rat   223 RMSKKGRTVIFSINQPQYSIFRFFDSLTLVASGKLMFHGPAQDALEYFTSAGYQYESHNNPADFF 287

  Fly   360 LEVAVG-------------EHQRDLNELIHAANKK---YYEDVDRHRYMSSDDMARLVESI-KEN 407
            |:|..|             ||: ||.|.:|...:|   .|.....|    ||..|:|.:.: ::.
  Rat   288 LDVINGGLCDTEEDGHEADEHE-DLYERLHQVTEKLANMYAQSPLH----SDTRAKLDQLLGEQK 347

  Fly   408 MGGKAVVKTSEALAAFAAAQFSSFDYVKPSPQELALEEIKALSGGPESADPDLLEKNLRPQPQPL 472
            ...::.::|:     |....:..|.::       .|...|...|.|                   
  Rat   348 QDRRSAMETT-----FVTPFWHQFGWI-------TLRSFKNFKGFP------------------- 381

  Fly   473 AKAGELARPPNAIRSASFLMQYVLLMQRILICAKRNYFLLLARIFSHIFIGVVFGYLYMNVGNNA 537
                                 :|.::|.|:.       ::||     :|:|.:| .|..||....
  Rat   382 ---------------------WVTVIQAIIA-------VILA-----VFVGTIF-RLLQNVCTEV 412

  Fly   538 QSVLGNYVYLYG-STLLLVYTGKMAVVLTFPLEIDMLTREHFNRWYKLGPYFL-SLISFEIPFQS 600
            ::..|...:|.| ..:|.|..|::     |.|:.:....||.:.:|::..||. .|::..||.:.
  Rat   413 KARAGLLFFLTGFECILSVSAGEL-----FLLDRNHFLHEHTSGYYRVSSYFFGKLLAELIPRRL 472

  Fly   601 LCTAMYIIISVHLTG-NDATDSFRIYYFMLLGIMASLSAQAWGFFVG---ATLPTKLAVFLGPIL 661
            |.:.::.:|:..:.| ......|.:..|.::.:.:|.|:.:.....|   |.|||.|..     :
  Rat   473 LPSMIFTLITYFIAGMKTGVKGFFVTIFTVMMLASSASSLSLSLGAGENTAALPTTLIT-----I 532

  Fly   662 AVMFSVF--GFCTRYIDITPLFRWMWHLSYFRAGFHGAL-NAIYGMDRPFLECPE---------- 713
            ..||.:|  |.....|:..|...|:.:||....||...| |...|.:    .|||          
  Rat   533 YFMFMLFFSGLSLFSINFLPQLSWIQYLSIPHYGFRALLHNEFLGQN----FCPEHNTEEVSRCQ 593

  Fly   714 TAMYCHFRSPKVFLKYMMIS-------DVHMS-DCLILMGIVIGVMHVLTL 756
            ..:.|   :.:.||:.:.|.       :.|:: .|::::.::|..:.:|.|
  Rat   594 NYVIC---TGEEFLQNLDIDSSSWGFWENHLALTCIMIILLMISYVRLLRL 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 81/232 (35%)
3a01204 123..765 CDD:273361 171/682 (25%)
ABC2_membrane 497..698 CDD:279410 50/208 (24%)
Abcg3l3NP_001100675.1 3a01204 64..644 CDD:273361 169/673 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.900

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