DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17646 and Abcg3l3

DIOPT Version :10

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_001100675.1 Gene:Abcg3l3 / 305142 RGDID:1564709 Length:647 Species:Rattus norvegicus


Alignment Length:701 Identity:177/701 - (25%)
Similarity:310/701 - (44%) Gaps:146/701 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IQFADVRY--TVKKFSFPERKFV-TKEILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSGF--- 164
            :.|.::.|  ||:. .||.|:.. ..|.|..::|....| |.|||||....:|.||:|::..   
  Rat    37 LSFHNISYRETVQS-GFPLRQQTHVMERLSSISGIMGPG-LNAIMGPQDGSRSLLLDVLAARRDP 99

  Fly   165 CSTGVSGDIRVNRKPMAPSSERFRQMLCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMD 229
            |  |:||||.||.||. |::  |:....|:.|:|::...:.|.:.:..:|.|:|...:|:..|..
  Rat   100 C--GLSGDILVNGKPQ-PAN--FKCTSGYVPQNDVIMHTVTVRDNLEFSAALRLPMTITRNEKRR 159

  Fly   230 LIKHILSLLGLDHRYNVPTGKLSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVALLK 294
            .|..:|.||.|:...|  |...|...:||.:||:||::..|:|:||:||||||..:.:..:|:|:
  Rat   160 RINEVLELLHLEKEQN--TKPRSKELRKRTSIAVELVTEHPILFLDDPTTGLDLRTTTDIIAVLR 222

  Fly   295 KLASQGHTIVCTIHQPSALIFEMFDKLYTVVDGHCMYQGPVRELVPFLADQQLVCPSYHNPADYL 359
            :::.:|.|::.:|:||...||..||.|..|..|..|:.||.::.:.:.........|::||||:.
  Rat   223 RMSKKGRTVIFSINQPQYSIFRFFDSLTLVASGKLMFHGPAQDALEYFTSAGYQYESHNNPADFF 287

  Fly   360 LEVAVG-------------EHQRDLNELIHAANKK---YYEDVDRHRYMSSDDMARLVESI-KEN 407
            |:|..|             ||: ||.|.:|...:|   .|.....|    ||..|:|.:.: ::.
  Rat   288 LDVINGGLCDTEEDGHEADEHE-DLYERLHQVTEKLANMYAQSPLH----SDTRAKLDQLLGEQK 347

  Fly   408 MGGKAVVKTSEALAAFAAAQFSSFDYVKPSPQELALEEIKALSGGPESADPDLLEKNLRPQPQPL 472
            ...::.::|:     |....:..|.::       .|...|...|.|                   
  Rat   348 QDRRSAMETT-----FVTPFWHQFGWI-------TLRSFKNFKGFP------------------- 381

  Fly   473 AKAGELARPPNAIRSASFLMQYVLLMQRILICAKRNYFLLLARIFSHIFIGVVFGYLYMNVGNNA 537
                                 :|.::|.|:.       ::||     :|:|.:| .|..||....
  Rat   382 ---------------------WVTVIQAIIA-------VILA-----VFVGTIF-RLLQNVCTEV 412

  Fly   538 QSVLGNYVYLYG-STLLLVYTGKMAVVLTFPLEIDMLTREHFNRWYKLGPYFL-SLISFEIPFQS 600
            ::..|...:|.| ..:|.|..|::     |.|:.:....||.:.:|::..||. .|::..||.:.
  Rat   413 KARAGLLFFLTGFECILSVSAGEL-----FLLDRNHFLHEHTSGYYRVSSYFFGKLLAELIPRRL 472

  Fly   601 LCTAMYIIISVHLTG-NDATDSFRIYYFMLLGIMASLSAQAWGFFVG---ATLPTKLAVFLGPIL 661
            |.:.::.:|:..:.| ......|.:..|.::.:.:|.|:.:.....|   |.|||.|..     :
  Rat   473 LPSMIFTLITYFIAGMKTGVKGFFVTIFTVMMLASSASSLSLSLGAGENTAALPTTLIT-----I 532

  Fly   662 AVMFSVF--GFCTRYIDITPLFRWMWHLSYFRAGFHGAL-NAIYGMDRPFLECPE---------- 713
            ..||.:|  |.....|:..|...|:.:||....||...| |...|.:    .|||          
  Rat   533 YFMFMLFFSGLSLFSINFLPQLSWIQYLSIPHYGFRALLHNEFLGQN----FCPEHNTEEVSRCQ 593

  Fly   714 TAMYCHFRSPKVFLKYMMIS-------DVHMS-DCLILMGIVIGVMHVLTL 756
            ..:.|   :.:.||:.:.|.       :.|:: .|::::.::|..:.:|.|
  Rat   594 NYVIC---TGEEFLQNLDIDSSSWGFWENHLALTCIMIILLMISYVRLLRL 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 3a01204 123..765 CDD:273361 171/682 (25%)
Abcg3l3NP_001100675.1 3a01204 64..644 CDD:273361 169/673 (25%)

Return to query results.
Submit another query.