DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17646 and Abcg4

DIOPT Version :9

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:734 Identity:258/734 - (35%)
Similarity:373/734 - (50%) Gaps:113/734 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GC-LGINCCTTAASSELSIDETSSTSSRGSCELTSKVTNDLNGFQSPNYHQAVAHANFDHC---D 102
            || ||......|.:.|...:....|:.      ..||.|.:...|           .|.|.   .
Mouse    10 GCGLGPGAVAMAVTLEDGAEPPVLTTH------LKKVENHITEAQ-----------RFSHLPKRS 57

  Fly   103 PVDIQFADVRYTVKKFSFPERKFVTKEILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSGFCST 167
            .|||:|.::.|:|::... .||...|.:|..|:|.|...||..|||||||||||.:|:::|:..:
Mouse    58 AVDIEFVELSYSVREGPC-WRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRES 121

  Fly   168 GVSGDIRVNRKPMAPSSERFRQMLCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMDLIK 232
            |:.|.|.||.:|.  ....||:|.|||.|||:|.|.|.|.|.|:::|:|||..|  :..|.:|:.
Mouse   122 GMKGQILVNGRPR--ELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEK--QEVKKELVT 182

  Fly   233 HILSLLGLDHRYNVPTGKLSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVALLKKLA 297
            .||:.|||....:..|..|||||:|||||||||::||||::.||||:||||:||...|:|:|.||
Mouse   183 EILTALGLMSCSHTRTALLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLA 247

  Fly   298 SQGHTIVCTIHQPSALIFEMFDKLYTVVDGHCMYQGPVRELVPFLADQQLVCPSYHNPADYLLEV 362
            ..|.|::||||||||.:||||||||.:..|.|:::|.|..|:|:|....|.||:||||||:::||
Mouse   248 HGGRTVICTIHQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEV 312

  Fly   363 AVGEHQRDLNELIHAANKKYYEDVDRHRYMSSDDMARLVESIKENMGGKAVVKTSEALAAFAAAQ 427
            |.||: .|||.::..|                                     ....|...|.. 
Mouse   313 ASGEY-GDLNPMLFRA-------------------------------------VQNGLCTMAEK- 338

  Fly   428 FSSFDYVKPSPQELALEEIKALSGGPESADPDLLEKNLRPQPQPLAKAGELARPP--NAIRSASF 490
                   |.||                       .||..|...|..       ||  :.|.|.:|
Mouse   339 -------KSSP-----------------------GKNELPAHCPTC-------PPELDPIESHTF 366

  Fly   491 ----LMQYVLLMQRILICAKRNYFLLLARIFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYLYGST 551
                |.|:.:|.:|..:...|:..|...|..||:.|||:.|.||:::|::|..|..|..:|:.|.
Mouse   367 ATSTLTQFCILFRRTFLSILRDTVLTHLRFMSHVLIGVLIGLLYLHIGDDASKVFNNTGFLFFSM 431

  Fly   552 LLLVYTGKMAVVLTFPLEIDMLTREHFNRWYKLGPYFLSLISFEIPFQSLCTAMYIIISVHLTGN 616
            |.|::...|..|||||||:.:..|||.|.||.|..|:|:....::|||.:|..:|..|...:||.
Mouse   432 LFLMFAALMPTVLTFPLEMAVFMREHLNYWYTLKAYYLAKTMADVPFQVVCPVVYCSIVYWMTGQ 496

  Fly   617 DATDSFRIYYFMLLGIMASLSAQAWGFFVG-ATLPTKLAVFLGPILAVMFSVF-GFCTRYIDITP 679
            .|..| |...|..|.|..:|.||:.|..:| |:...::|.|:||:.|:...:| ||...:..|..
Mouse   497 PAETS-RFLLFSALAIATALVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFKTIPT 560

  Fly   680 LFRWMWHLSYFRAGFHGALNAIYGMDRPFLECPETAMYCHFRSPKVFLKYMMISDVHMSDCLILM 744
            ..:|..:|||.|.||.|.:..||||:|..|.|.:.  .|.||.|::.|:.:.:.:..:....:::
Mouse   561 YLQWSSYLSYVRYGFEGLILTIYGMERGHLTCLDE--QCPFRDPQIILRELDVEEAKLYMDFLVL 623

  Fly   745 GIVIGVMHVLTLITLWHKL 763
            ||....:.:|..:.|.:::
Mouse   624 GIFFLALRLLAYLVLRYRV 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 115/229 (50%)
3a01204 123..765 CDD:273361 239/649 (37%)
ABC2_membrane 497..698 CDD:279410 75/202 (37%)
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 248/694 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.870

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