DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17646 and wht-4

DIOPT Version :9

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_494495.3 Gene:wht-4 / 173671 WormBaseID:WBGene00017179 Length:636 Species:Caenorhabditis elegans


Alignment Length:603 Identity:161/603 - (26%)
Similarity:270/603 - (44%) Gaps:121/603 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 KEILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSGFCSTGVS--GDIRVNRKPMAPSSERFRQM 190
            ||::..::|....||:.|:||.|||||:||:|:::...:.||.  ||:.||.|.:  :.::.|||
 Worm    51 KEVIRNVSGVAEPGEVLALMGGSGAGKTTLMNILAHLDTNGVEYLGDVTVNGKKI--TKQKMRQM 113

  Fly   191 LCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMDLIKHIL----------SLLGLDHRYN 245
            ..|:.|.||....|.|.|.:...||:::. ..|...||:.::::|          :|:|:.:|..
 Worm   114 CAYVQQVDLFCGTLTVREQLTYTAHMRMK-NATVQQKMERVENVLRDMNLTDCQNTLIGIPNRMK 177

  Fly   246 VPTGKLSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVALLKKLASQGHTIVCTIHQP 310
                .:|.|:|||||.|.|::::|.:|:.||||:|||:...|..|..|..||::|.||:..:|||
 Worm   178 ----GISIGEKKRLAFACEILTDPKILFCDEPTSGLDAFMASEVVRALLDLANKGKTIIVVLHQP 238

  Fly   311 SALIFEMFDKLYTVVDGHCMYQGPVRELVPFL--ADQQLVCPSYHNPADYLL-EVAVGEHQRDLN 372
            |:.:|.||.|:..:..|..:|.|.|..|.||.  .......|..:||||::: |:::......  
 Worm   239 SSTVFRMFHKVCFMATGKTVYHGAVDRLCPFFDKLGPDFRVPESYNPADFVMSEISISPETEQ-- 301

  Fly   373 ELIHAANKKYYEDVDR-----HRYMSSDDMARLVESIKENMGGKAVVKTSEALAAFAAAQFSSFD 432
                       |||.|     |.|.:||            :|.:.:.||..|:..|         
 Worm   302 -----------EDVTRIEYLIHEYQNSD------------IGTQMLKKTRTAVDEF--------- 334

  Fly   433 YVKPSPQELALEEIKALSGGPESADPDLLEKNLRPQPQPLAKAGELARPPNAIRSASFLMQYVLL 497
                              ||....:.|                ||      :..:::|..|:.:|
 Worm   335 ------------------GGYGDDEDD----------------GE------SRYNSTFGTQFEIL 359

  Fly   498 MQRILICAKRNYFLLLARIFSHIFIGVVFGYLYMNV---GNNAQSVLGNYVYLYGSTLLLVYTGK 559
            ::|.|....|:..||..|....:...::.|.:...|   |...|::.|...........|.|...
 Worm   360 LKRSLRTTFRDPLLLRVRFAQILATAILVGIVNWRVELKGPTIQNLEGVMYNCARDMTFLFYFPS 424

  Fly   560 MAVVLTFPLEIDMLTREHFNRWYKLGPYFLSLISFEIPFQSLCTAMYIIISVHLTGNDAT-DSFR 623
            :.|:.:   |:.:..|||.:..|.:..|||:....|:|..::...:|..|...:.|..|: .||.
 Worm   425 VNVITS---ELPVFLREHKSNIYSVEAYFLAKSLAELPQYTILPMIYGTIIYWMAGLVASVTSFL 486

  Fly   624 IYYFM---LLGIMASLSAQAWGFFVGATL--PTKLAVFLGPILAVMFSVF-GFCTRYIDITPLFR 682
            ::.|:   |..:..|::      :|||.:  ...|.|...|:..:...|| ||......|...::
 Worm   487 VFVFVCITLTWVAVSIA------YVGACIFGDEGLVVTFMPMFVLPMLVFGGFYVNANSIPVYYQ 545

  Fly   683 WMWHLSYFRAGFHGALNA 700
            ::..:|:|:.||. ||.|
 Worm   546 YVSFVSWFKHGFE-ALEA 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 78/216 (36%)
3a01204 123..765 CDD:273361 161/603 (27%)
ABC2_membrane 497..698 CDD:279410 49/210 (23%)
wht-4NP_494495.3 3a01204 49..636 CDD:273361 161/603 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2712
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.770

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