DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17646 and Abcg1

DIOPT Version :9

Sequence 1:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster
Sequence 2:NP_033723.1 Gene:Abcg1 / 11307 MGIID:107704 Length:666 Species:Mus musculus


Alignment Length:758 Identity:273/758 - (36%)
Similarity:401/758 - (52%) Gaps:107/758 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AACCVGGANSDASSSSGVCSLKGHHGDPDSGCLGINCCTTAASSELSIDETSSTSSRGSCELTSK 76
            ||..||.|.:.:|.|:.:.       :|.|.|:.::   ...||  ::||..:....|..:   |
Mouse     6 AAFSVGTAMNASSYSAAMT-------EPKSVCVSVD---EVVSS--NVDEVETDLLNGHLK---K 55

  Fly    77 VTNDLNGFQSPNYHQAVAHANFDHCDPVDIQFADVRYTVKKFSFPE----RKFVTKEILHGLNGS 137
            |.|        |:.:|...::......|:|:|.|:.|:|     ||    :|...|.:|.|::|.
Mouse    56 VDN--------NFTEAQRFSSLPRRAAVNIEFKDLSYSV-----PEGPWWKKKGYKTLLKGISGK 107

  Fly   138 FRSGELTAIMGPSGAGKSTLLNVMSGFCSTGVSGDIRVNRKPMAPSSERFRQMLCYIHQDDLLRP 202
            |.||||.|||||||||||||:|:::|:..||:.|.:.:|..|.  ....||::.|||.|||:|.|
Mouse   108 FNSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLINGMPR--DLRCFRKVSCYIMQDDMLLP 170

  Fly   203 QLLVGEIMLLAAHLKLGFKVTKAYKMDLIKHILSLLGLDHRYNVPTGKLSGGQKKRLAIALELIS 267
            .|.|.|.|:::|||||..|  ...:.:::|.||:.|||....|..||.|||||:|||||||||::
Mouse   171 HLTVQEAMMVSAHLKLQEK--DEGRREMVKEILTALGLLPCANTRTGSLSGGQRKRLAIALELVN 233

  Fly   268 NPPVLYLDEPTTGLDSSSCSSCVALLKKLASQGHTIVCTIHQPSALIFEMFDKLYTVVDGHCMYQ 332
            ||||::.||||:||||:||...|:|:|.||..|.:||||||||||.:||:||:||.:..|.|:|:
Mouse   234 NPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQLYVLSQGQCVYR 298

  Fly   333 GPVRELVPFLADQQLVCPSYHNPADYLLEVAVGEHQRDLNELIHAANKKYYEDVDRHRYMSSDDM 397
            |.|..|||:|.|..|.||:||||||:::|||.||:                          .|..
Mouse   299 GKVSNLVPYLRDLGLNCPTYHNPADFVMEVASGEY--------------------------GDQN 337

  Fly   398 ARLVESIKENMGGKAVVKTSEALAAFAAAQFSSFDYVKPSPQELALEEIKALSGGPESADPDLLE 462
            :|||.:::|.|                    ...||             |...||....:|.|..
Mouse   338 SRLVRAVREGM--------------------CDADY-------------KRDLGGDTDVNPFLWH 369

  Fly   463 KNLRPQPQPLAKAGELARPPNAIRSASFLMQYVLLMQRILICAKRNYFLLLARIFSHIFIGVVFG 527
            :........:......        |||.|.|:.:|.:|..:...|:..|...||.|||.||::.|
Mouse   370 RPAEEDSASMEGCHSF--------SASCLTQFCILFKRTFLSIMRDSVLTHLRITSHIGIGLLIG 426

  Fly   528 YLYMNVGNNAQSVLGNYVYLYGSTLLLVYTGKMAVVLTFPLEIDMLTREHFNRWYKLGPYFLSLI 592
            .||:.:||.|:.||.|..:|:.|.|.|::...|..|||||||:.:..|||.|.||.|..|:|:..
Mouse   427 LLYLGIGNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKT 491

  Fly   593 SFEIPFQSLCTAMYIIISVHLTGNDATDSFRIYYFMLLGIMASLSAQAWGFFVG-ATLPTKLAVF 656
            ..::|||.:....|..|...:| :..:|:.|...|..||.|.||.||:.|..:| |:...::|.|
Mouse   492 MADVPFQIMFPVAYCSIVYWMT-SQPSDAVRFVLFAALGTMTSLVAQSLGLLIGAASTSLQVATF 555

  Fly   657 LGPILAVMFSVF-GFCTRYIDITPLFRWMWHLSYFRAGFHGALNAIYGMDRPFLECPETAMYCHF 720
            :||:.|:...:| ||...:..|....:||.::||.|.||.|.:.:|||:||..|.| :.|..|||
Mouse   556 VGPVTAIPVLLFSGFFVSFDTIPAYLQWMSYISYVRYGFEGVILSIYGLDREDLHC-DIAETCHF 619

  Fly   721 RSPKVFLKYMMISDVHMSDCLILMGIVIGVMHVLTLITLWHKL 763
            :..:..|:.:.:.:..:....|::||....:.::....|.:|:
Mouse   620 QKSEAILRELDVENAKLYLDFIVLGIFFISLRLIAYFVLRYKI 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 120/233 (52%)
3a01204 123..765 CDD:273361 245/643 (38%)
ABC2_membrane 497..698 CDD:279410 77/202 (38%)
Abcg1NP_033723.1 3a01204 60..666 CDD:273361 254/681 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2712
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.830

Return to query results.
Submit another query.